Search Results for author: Abeed Sarker

Found 32 papers, 1 papers with code

Emory at WNUT-2020 Task 2: Combining Pretrained Deep Learning Models and Feature Enrichment for Informative Tweet Identification

no code implementations EMNLP (WNUT) 2020 Yuting Guo, Mohammed Ali Al-Garadi, Abeed Sarker

This paper describes the system developed by the Emory team for the WNUT-2020 Task 2: “Identifi- cation of Informative COVID-19 English Tweet”.

Task 2

Pre-trained Transformer-based Classification and Span Detection Models for Social Media Health Applications

no code implementations NAACL (SMM4H) 2021 Yuting Guo, Yao Ge, Mohammed Ali Al-Garadi, Abeed Sarker

This paper describes our approach for six classification tasks (Tasks 1a, 3a, 3b, 4 and 5) and one span detection task (Task 1b) from the Social Media Mining for Health (SMM4H) 2021 shared tasks.

Classification

An Ensemble Model for Automatic Grading of Evidence

no code implementations ALTA 2021 Yuting Guo, Yao Ge, Ruqi Liao, Abeed Sarker

This paper describes our approach for the automatic grading of evidence task from the Australasian Language Technology Association (ALTA) Shared Task 2021.

Overview of the Seventh Social Media Mining for Health Applications (#SMM4H) Shared Tasks at COLING 2022

no code implementations SMM4H (COLING) 2022 Davy Weissenbacher, Juan Banda, Vera Davydova, Darryl Estrada Zavala, Luis Gasco Sánchez, Yao Ge, Yuting Guo, Ari Klein, Martin Krallinger, Mathias Leddin, Arjun Magge, Raul Rodriguez-Esteban, Abeed Sarker, Lucia Schmidt, Elena Tutubalina, Graciela Gonzalez-Hernandez

For the past seven years, the Social Media Mining for Health Applications (#SMM4H) shared tasks have promoted the community-driven development and evaluation of advanced natural language processing systems to detect, extract, and normalize health-related information in public, user-generated content.

Evaluating Large Language Models for Health-Related Text Classification Tasks with Public Social Media Data

no code implementations27 Mar 2024 Yuting Guo, Anthony Ovadje, Mohammed Ali Al-Garadi, Abeed Sarker

We developed three approaches for leveraging LLMs for text classification: employing LLMs as zero-shot classifiers, us-ing LLMs as annotators to annotate training data for supervised classifiers, and utilizing LLMs with few-shot examples for augmentation of manually annotated data.

Data Augmentation text-classification +1

Social Media as a Sensor: Analyzing Twitter Data for Breast Cancer Medication Effects Using Natural Language Processing

no code implementations26 Feb 2024 Seibi Kobara, Alireza Rafiei, Masoud Nateghi, Selen Bozkurt, Rishikesan Kamaleswaran, Abeed Sarker

This analysis highlighted not only the utility of NLP techniques in unstructured social media data to identify self-reported breast cancer posts, medication usage patterns, and treatment side effects but also the richness of social data on such clinical questions.

Learning from Two Decades of Blood Pressure Data: Demography-Specific Patterns Across 75 Million Patient Encounters

no code implementations2 Feb 2024 Seyedeh Somayyeh Mousavi, Yuting Guo, Abeed Sarker, Reza Sameni

Hypertension remains a global health concern with a rising prevalence, necessitating effective monitoring and understanding of blood pressure (BP) dynamics.

Leveraging Large Language Models for Analyzing Blood Pressure Variations Across Biological Sex from Scientific Literature

no code implementations2 Feb 2024 Yuting Guo, Seyedeh Somayyeh Mousavi, Reza Sameni, Abeed Sarker

Based on the automatically-extracted information from these articles, we conducted an analysis of the variations of BP values across biological sex.

Language Modelling Large Language Model

Generalizable Natural Language Processing Framework for Migraine Reporting from Social Media

no code implementations23 Dec 2022 Yuting Guo, Swati Rajwal, Sahithi Lakamana, Chia-Chun Chiang, Paul C. Menell, Adnan H. Shahid, Yi-Chieh Chen, Nikita Chhabra, Wan-Ju Chao, Chieh-Ju Chao, Todd J. Schwedt, Imon Banerjee, Abeed Sarker

In this paper, we (i) verify that there is substantial migraine-related chatter available on social media (Twitter and Reddit), self-reported by migraine sufferers; (ii) develop a platform-independent text classification system for automatically detecting self-reported migraine-related posts, and (iii) conduct analyses of the self-reported posts to assess the utility of social media for studying this problem.

Management text-classification +1

Social media mining for toxicovigilance of prescription medications: End-to-end pipeline, challenges and future work

no code implementations18 Nov 2022 Abeed Sarker

We developed a sophisticated end-to-end pipeline for mining information about nonmedical prescription medication use from social media, namely Twitter and Reddit.

Towards Automatic Bot Detection in Twitter for Health-related Tasks

no code implementations29 Sep 2019 Anahita Davoudi, Ari Z. Klein, Abeed Sarker, Graciela Gonzalez-Hernandez

Our approach obtains F_1 scores of 0. 7 for the "bot" class, representing improvements of 0. 339.

Overview of the Fourth Social Media Mining for Health (SMM4H) Shared Tasks at ACL 2019

no code implementations WS 2019 Davy Weissenbacher, Abeed Sarker, Arjun Magge, Ashlynn Daughton, Karen O{'}Connor, Michael J. Paul, Gonzalez-Hern, Graciela ez

We present the Social Media Mining for Health Shared Tasks collocated with the ACL at Florence in 2019, which address these challenges for health monitoring and surveillance, utilizing state of the art techniques for processing noisy, real-world, and substantially creative language expressions from social media users.

Task 2

Deep Neural Networks Ensemble for Detecting Medication Mentions in Tweets

no code implementations10 Apr 2019 Davy Weissenbacher, Abeed Sarker, Ari Klein, Karen O'Connor, Arjun Magge Ranganatha, Graciela Gonzalez-Hernandez

A fundamental step to incorporating Twitter data in pharmacoepidemiological research is to automatically recognize medication mentions in tweets.

Ensemble Learning

Automatically Detecting Self-Reported Birth Defect Outcomes on Twitter for Large-scale Epidemiological Research

no code implementations22 Oct 2018 Ari Z. Klein, Abeed Sarker, Davy Weissenbacher, Graciela Gonzalez-Hernandez

The primary objective of this study was to take the first step towards scaling the use of social media for observing pregnancies with birth defect outcomes, namely, developing methods for automatically detecting tweets by users reporting their birth defect outcomes.

BIG-bench Machine Learning

Overview of the Third Social Media Mining for Health (SMM4H) Shared Tasks at EMNLP 2018

no code implementations WS 2018 Davy Weissenbacher, Abeed Sarker, Michael J. Paul, Gonzalez-Hern, Graciela ez

The goals of the SMM4H shared tasks are to release annotated social media based health related datasets to the research community, and to compare the performances of natural language processing and machine learning systems on tasks involving these datasets.

General Classification Task 2 +1

An unsupervised and customizable misspelling generator for mining noisy health-related text sources

1 code implementation4 Jun 2018 Abeed Sarker, Graciela Gonzalez-Hernandez

Our proposed spelling variant generator has several advantages over the current state-of-the-art and other types of variant generators-(i) it is capable of filtering out lexically similar but semantically dissimilar terms, (ii) the number of variants generated is low as many low-frequency and ambiguous misspellings are filtered out, and (iii) the system is fully automatic, customizable and easily executable.

Retrieval

HLP@UPenn at SemEval-2017 Task 4A: A simple, self-optimizing text classification system combining dense and sparse vectors

no code implementations SEMEVAL 2017 Abeed Sarker, Graciela Gonzalez

We present a simple supervised text classification system that combines sparse and dense vector representations of words, and generalized representations of words via clusters.

Epidemiology General Classification +3

Detecting Personal Medication Intake in Twitter: An Annotated Corpus and Baseline Classification System

no code implementations WS 2017 Ari Klein, Abeed Sarker, Masoud Rouhizadeh, Karen O{'}Connor, Graciela Gonzalez

Social media sites (e. g., Twitter) have been used for surveillance of drug safety at the population level, but studies that focus on the effects of medications on specific sets of individuals have had to rely on other sources of data.

Epidemiology General Classification

Automated text summarisation and evidence-based medicine: A survey of two domains

no code implementations25 Jun 2017 Abeed Sarker, Diego Molla, Cecile Paris

We envision that this survey will serve as a first resource for the development of future operational text summarisation techniques for EBM.

Social media mining for identification and exploration of health-related information from pregnant women

no code implementations8 Feb 2017 Pramod Bharadwaj Chandrashekar, Arjun Magge, Abeed Sarker, Graciela Gonzalez

We hypothesize that we can use social media to identify cohorts of pregnant women and follow them over time to analyze crucial health-related information.

Data, tools and resources for mining social media drug chatter

no code implementations WS 2016 Abeed Sarker, Graciela Gonzalez

In this paper, we discuss the preparation of these guidelines, outline the data sets prepared, and present an overview of our state-of-the-art systems for data collection, supervised classification, and information extraction.

Epidemiology General Classification +2

Mining the Web for Pharmacovigilance: the Case Study of Duloxetine and Venlafaxine

no code implementations8 Oct 2016 Abbas Chokor, Abeed Sarker, Graciela Gonzalez

Adverse reactions caused by drugs following their release into the market are among the leading causes of death in many countries.

Automated Extraction of Number of Subjects in Randomised Controlled Trials

no code implementations22 Jun 2016 Abeed Sarker

We present a simple approach for automatically extracting the number of subjects involved in randomised controlled trials (RCT).

General Classification Question Answering

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