1 code implementation • 31 Oct 2023 • Jihao Andreas Lin, Shreyas Padhy, Javier Antorán, Austin Tripp, Alexander Terenin, Csaba Szepesvári, José Miguel Hernández-Lobato, David Janz
We study the optimisation problem associated with Gaussian process regression using squared loss.
1 code implementation • 30 Oct 2023 • Krzysztof Maziarz, Austin Tripp, Guoqing Liu, Megan Stanley, Shufang Xie, Piotr Gaiński, Philipp Seidl, Marwin Segler
The planning of how to synthesize molecules, also known as retrosynthesis, has been a growing focus of the machine learning and chemistry communities in recent years.
1 code implementation • 13 Oct 2023 • Austin Tripp, Krzysztof Maziarz, Sarah Lewis, Marwin Segler, José Miguel Hernández-Lobato
Retrosynthesis is the task of planning a series of chemical reactions to create a desired molecule from simpler, buyable molecules.
1 code implementation • 13 Oct 2023 • Austin Tripp, José Miguel Hernández-Lobato
Generating molecules, both in a directed and undirected fashion, is a huge part of the drug discovery pipeline.
1 code implementation • 31 Jan 2023 • Guoqing Liu, Di Xue, Shufang Xie, Yingce Xia, Austin Tripp, Krzysztof Maziarz, Marwin Segler, Tao Qin, Zongzhang Zhang, Tie-Yan Liu
Retrosynthesis, which aims to find a route to synthesize a target molecule from commercially available starting materials, is a critical task in drug discovery and materials design.
Ranked #1 on Multi-step retrosynthesis on USPTO-190
1 code implementation • NeurIPS 2023 • Ryan-Rhys Griffiths, Leo Klarner, Henry B. Moss, Aditya Ravuri, Sang Truong, Samuel Stanton, Gary Tom, Bojana Rankovic, Yuanqi Du, Arian Jamasb, Aryan Deshwal, Julius Schwartz, Austin Tripp, Gregory Kell, Simon Frieder, Anthony Bourached, Alex Chan, Jacob Moss, Chengzhi Guo, Johannes Durholt, Saudamini Chaurasia, Felix Strieth-Kalthoff, Alpha A. Lee, Bingqing Cheng, Alán Aspuru-Guzik, Philippe Schwaller, Jian Tang
By defining such kernels in GAUCHE, we seek to open the door to powerful tools for uncertainty quantification and Bayesian optimisation in chemistry.
1 code implementation • 5 May 2022 • Wenlin Chen, Austin Tripp, José Miguel Hernández-Lobato
We propose Adaptive Deep Kernel Fitting with Implicit Function Theorem (ADKF-IFT), a novel framework for learning deep kernel Gaussian processes (GPs) by interpolating between meta-learning and conventional deep kernel learning.
no code implementations • NeurIPS Workshop AI4Scien 2021 • Austin Tripp, Gregor N. C. Simm, José Miguel Hernández-Lobato
De novo molecular design is a thriving research area in machine learning (ML) that lacks ubiquitous, high-quality, standardized benchmark tasks.
1 code implementation • NeurIPS 2020 • Austin Tripp, Erik Daxberger, José Miguel Hernández-Lobato
We introduce an improved method for efficient black-box optimization, which performs the optimization in the low-dimensional, continuous latent manifold learned by a deep generative model.
Ranked #1 on Molecular Graph Generation on ZINC