Search Results for author: Azra Bihorac

Found 31 papers, 0 papers with code

Global Contrastive Training for Multimodal Electronic Health Records with Language Supervision

no code implementations10 Apr 2024 Yingbo Ma, Suraj Kolla, Zhenhong Hu, Dhruv Kaliraman, Victoria Nolan, Ziyuan Guan, Yuanfang Ren, Brooke Armfield, Tezcan Ozrazgat-Baslanti, Jeremy A. Balch, Tyler J. Loftus, Parisa Rashidi, Azra Bihorac, Benjamin Shickel

To harness the interconnected relationships between medical time series and clinical notes, the framework equips a global contrastive loss, aligning a patient's multimodal feature representations with the corresponding discharge summaries.

Contrastive Learning Time Series

Federated learning model for predicting major postoperative complications

no code implementations9 Apr 2024 Yonggi Park, Yuanfang Ren, Benjamin Shickel, Ziyuan Guan, Ayush Patela, Yingbo Ma, Zhenhong Hu, Tyler J. Loftus, Parisa Rashidi, Tezcan Ozrazgat-Baslanti, Azra Bihorac

Federated learning models achieved comparable AUROC performance to central learning models, except for prolonged ICU stay, where the performance of federated learning models was slightly higher than central learning models at UFH GNV center, but slightly lower at UFH JAX center.

Federated Learning

A multi-cohort study on prediction of acute brain dysfunction states using selective state space models

no code implementations11 Mar 2024 Brandon Silva, Miguel Contreras, Sabyasachi Bandyopadhyay, Yuanfang Ren, Ziyuan Guan, Jeremy Balch, Kia Khezeli, Tezcan Ozrazgat Baslanti, Ben Shickel, Azra Bihorac, Parisa Rashidi

Our research fills these gaps in the existing literature by dynamically predicting delirium, coma, and mortality for 12-hour intervals throughout an ICU stay and validating on two public datasets.

Leveraging Computer Vision in the Intensive Care Unit (ICU) for Examining Visitation and Mobility

no code implementations10 Mar 2024 Scott Siegel, Jiaqing Zhang, Sabyasachi Bandyopadhyay, Subhash Nerella, Brandon Silva, Tezcan Baslanti, Azra Bihorac, Parisa Rashidi

Likewise, while mobility can be an important indicator of recovery or deterioration in ICU patients, it is only captured sporadically or not captured at all.

Temporal Cross-Attention for Dynamic Embedding and Tokenization of Multimodal Electronic Health Records

no code implementations6 Mar 2024 Yingbo Ma, Suraj Kolla, Dhruv Kaliraman, Victoria Nolan, Zhenhong Hu, Ziyuan Guan, Yuanfang Ren, Brooke Armfield, Tezcan Ozrazgat-Baslanti, Tyler J. Loftus, Parisa Rashidi, Azra Bihorac, Benjamin Shickel

The breadth, scale, and temporal granularity of modern electronic health records (EHR) systems offers great potential for estimating personalized and contextual patient health trajectories using sequential deep learning.

Time Series

The Potential of Wearable Sensors for Assessing Patient Acuity in Intensive Care Unit (ICU)

no code implementations3 Nov 2023 Jessica Sena, Mohammad Tahsin Mostafiz, Jiaqing Zhang, Andrea Davidson, Sabyasachi Bandyopadhyay, Ren Yuanfang, Tezcan Ozrazgat-Baslanti, Benjamin Shickel, Tyler Loftus, William Robson Schwartz, Azra Bihorac, Parisa Rashidi

In this study, we evaluated the impact of integrating mobility data collected from wrist-worn accelerometers with clinical data obtained from EHR for developing an AI-driven acuity assessment score.

Detecting Visual Cues in the Intensive Care Unit and Association with Patient Clinical Status

no code implementations1 Nov 2023 Subhash Nerella, Ziyuan Guan, Andrea Davidson, Yuanfang Ren, Tezcan Baslanti, Brooke Armfield, Patrick Tighe, Azra Bihorac, Parisa Rashidi

We leveraged our AU-ICU dataset with 107, 064 frames collected in the ICU annotated with facial action units (AUs) labels by trained annotators.

Identifying acute illness phenotypes via deep temporal interpolation and clustering network on physiologic signatures

no code implementations27 Jul 2023 Yuanfang Ren, Yanjun Li, Tyler J. Loftus, Jeremy Balch, Kenneth L. Abbott, Shounak Datta, Matthew M. Ruppert, Ziyuan Guan, Benjamin Shickel, Parisa Rashidi, Tezcan Ozrazgat-Baslanti, Azra Bihorac

With clustering analysis for vital signs within six hours of admission, patient phenotypes with distinct pathophysiological signatures and outcomes may support early clinical decisions.

Clustering

Transformers in Healthcare: A Survey

no code implementations30 Jun 2023 Subhash Nerella, Sabyasachi Bandyopadhyay, Jiaqing Zhang, Miguel Contreras, Scott Siegel, Aysegul Bumin, Brandon Silva, Jessica Sena, Benjamin Shickel, Azra Bihorac, Kia Khezeli, Parisa Rashidi

With Artificial Intelligence (AI) increasingly permeating various aspects of society, including healthcare, the adoption of the Transformers neural network architecture is rapidly changing many applications.

Fairness

AI-Enhanced Intensive Care Unit: Revolutionizing Patient Care with Pervasive Sensing

no code implementations11 Mar 2023 Subhash Nerella, Ziyuan Guan, Scott Siegel, Jiaqing Zhang, Kia Khezeli, Azra Bihorac, Parisa Rashidi

However, the extent of patient monitoring in the ICU is limited due to time constraints and the workload on healthcare providers.

Computable Phenotypes to Characterize Changing Patient Brain Dysfunction in the Intensive Care Unit

no code implementations9 Mar 2023 Yuanfang Ren, Tyler J. Loftus, Ziyuan Guan, Rayon Uddin, Benjamin Shickel, Carolina B. Maciel, Katharina Busl, Parisa Rashidi, Azra Bihorac, Tezcan Ozrazgat-Baslanti

We developed algorithms to quantify acute brain dysfunction status including coma, delirium, normal, or death at 12-hour intervals of each ICU admission and to identify acute brain dysfunction phenotypes using continuous acute brain dysfunction status and k-means clustering approach.

Decision Making ICU Mortality

Clinical Courses of Acute Kidney Injury in Hospitalized Patients: A Multistate Analysis

no code implementations8 Mar 2023 Esra Adiyeke, Yuanfang Ren, Ziyuan Guan, Matthew M. Ruppert, Parisa Rashidi, Azra Bihorac, Tezcan Ozrazgat-Baslanti

At 14 days following Stage 1 AKI, patients with more frail conditions (Charlson comorbidity index greater than or equal to 3 and had prolonged ICU stay) had lower proportion of transitioning to No AKI or discharge states.

End-to-End Machine Learning Framework for Facial AU Detection in Intensive Care Units

no code implementations12 Nov 2022 Subhash Nerella, Kia Khezeli, Andrea Davidson, Patrick Tighe, Azra Bihorac, Parisa Rashidi

In this work, we evaluated two vision transformer models, namely ViT and SWIN, for AU detection on our Pain-ICU dataset and also external datasets.

Multi-Task Prediction of Clinical Outcomes in the Intensive Care Unit using Flexible Multimodal Transformers

no code implementations9 Nov 2021 Benjamin Shickel, Patrick J. Tighe, Azra Bihorac, Parisa Rashidi

Recent deep learning research based on Transformer model architectures has demonstrated state-of-the-art performance across a variety of domains and tasks, mostly within the computer vision and natural language processing domains.

Posture Recognition in the Critical Care Settings using Wearable Devices

no code implementations4 Oct 2021 Anis Davoudi, Patrick J. Tighe, Azra Bihorac, Parisa Rashidi

Low physical activity levels in the intensive care units (ICU) patients have been linked to adverse clinical outcomes.

Application of Deep Interpolation Network for Clustering of Physiologic Time Series

no code implementations27 Apr 2020 Yanjun Li, Yuanfang Ren, Tyler J. Loftus, Shounak Datta, M. Ruppert, Ziyuan Guan, Dapeng Wu, Parisa Rashidi, Tezcan Ozrazgat-Baslanti, Azra Bihorac

M Interpretation: In a heterogeneous cohort of hospitalized patients, a deep interpolation network extracted representations from vital sign data measured within six hours of hospital admission.

Clustering Time Series +1

Dynamic Predictions of Postoperative Complications from Explainable, Uncertainty-Aware, and Multi-Task Deep Neural Networks

no code implementations27 Apr 2020 Benjamin Shickel, Tyler J. Loftus, Matthew Ruppert, Gilbert R. Upchurch, Tezcan Ozrazgat-Baslanti, Parisa Rashidi, Azra Bihorac

In a longitudinal cohort study of 56, 242 patients undergoing 67, 481 inpatient surgical procedures at a university medical center, we compared deep learning models with random forests for predicting nine common postoperative complications using preoperative, intraoperative, and perioperative patient data.

Decision Making Multi-Task Learning +2

Computable Phenotypes of Patient Acuity in the Intensive Care Unit

no code implementations27 Apr 2020 Yuanfang Ren, Jeremy Balch, Kenneth L. Abbott, Tyler J. Loftus, Benjamin Shickel, Parisa Rashidi, Azra Bihorac, Tezcan Ozrazgat-Baslanti

We gathered two single-center, longitudinal electronic health record datasets for 51, 372 adult ICU patients admitted to the University of Florida Health (UFH) Gainesville (GNV) and Jacksonville (JAX).

Decision Making

Automated Detection of Rest Disruptions in Critically Ill Patients

no code implementations21 Apr 2020 Vasundhra Iyengar, Azra Bihorac, Parisa Rashidi

Sleep has been shown to be an indispensable and important component of patients recovery process.

Sleep Quality

Joint Distribution and Transitions of Pain and Activity in Critically Ill Patients

no code implementations20 Apr 2020 Florenc Demrozi, Graziano Pravadelli, Patrick J. Tighe, Azra Bihorac, Parisa Rashidi

Pain and physical function are both essential indices of recovery in critically ill patients in the Intensive Care Units (ICU).

Human Activity Recognition using Inertial, Physiological and Environmental Sensors: a Comprehensive Survey

no code implementations19 Apr 2020 Florenc Demrozi, Graziano Pravadelli, Azra Bihorac, Parisa Rashidi

In the last decade, Human Activity Recognition (HAR) has become a vibrant research area, especially due to the spread of electronic devices such as smartphones, smartwatches and video cameras present in our daily lives.

BIG-bench Machine Learning Human Activity Recognition

Improved Predictive Models for Acute Kidney Injury with IDEAs: Intraoperative Data Embedded Analytics

no code implementations11 May 2018 Lasith Adhikari, Tezcan Ozrazgat-Baslanti, Paul Thottakkara, Ashkan Ebadi, Amir Motaei, Parisa Rashidi, Xiaolin Li, Azra Bihorac

We used machine learning and statistical analysis techniques to develop perioperative models to predict the risk of AKI (risk during the first 3 days, 7 days, and until the discharge day) before and after the surgery.

Time Series Time Series Analysis

The Intelligent ICU Pilot Study: Using Artificial Intelligence Technology for Autonomous Patient Monitoring

no code implementations25 Apr 2018 Anis Davoudi, Kumar Rohit Malhotra, Benjamin Shickel, Scott Siegel, Seth Williams, Matthew Ruppert, Emel Bihorac, Tezcan Ozrazgat-Baslanti, Patrick J. Tighe, Azra Bihorac, Parisa Rashidi

In this pilot study, we examined the feasibility of using pervasive sensing technology and artificial intelligence for autonomous and granular monitoring of critically ill patients and their environment in the Intensive Care Unit (ICU).

Action Unit Detection Face Detection +4

DeepSOFA: A Continuous Acuity Score for Critically Ill Patients using Clinically Interpretable Deep Learning

no code implementations28 Feb 2018 Benjamin Shickel, Tyler J. Loftus, Lasith Adhikari, Tezcan Ozrazgat-Baslanti, Azra Bihorac, Parisa Rashidi

Traditional methods for assessing illness severity and predicting in-hospital mortality among critically ill patients require time-consuming, error-prone calculations using static variable thresholds.

Decision Making

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