no code implementations • 10 Apr 2024 • Yingbo Ma, Suraj Kolla, Zhenhong Hu, Dhruv Kaliraman, Victoria Nolan, Ziyuan Guan, Yuanfang Ren, Brooke Armfield, Tezcan Ozrazgat-Baslanti, Jeremy A. Balch, Tyler J. Loftus, Parisa Rashidi, Azra Bihorac, Benjamin Shickel
To harness the interconnected relationships between medical time series and clinical notes, the framework equips a global contrastive loss, aligning a patient's multimodal feature representations with the corresponding discharge summaries.
no code implementations • 9 Apr 2024 • Yonggi Park, Yuanfang Ren, Benjamin Shickel, Ziyuan Guan, Ayush Patela, Yingbo Ma, Zhenhong Hu, Tyler J. Loftus, Parisa Rashidi, Tezcan Ozrazgat-Baslanti, Azra Bihorac
Federated learning models achieved comparable AUROC performance to central learning models, except for prolonged ICU stay, where the performance of federated learning models was slightly higher than central learning models at UFH GNV center, but slightly lower at UFH JAX center.
no code implementations • 11 Mar 2024 • Brandon Silva, Miguel Contreras, Sabyasachi Bandyopadhyay, Yuanfang Ren, Ziyuan Guan, Jeremy Balch, Kia Khezeli, Tezcan Ozrazgat Baslanti, Ben Shickel, Azra Bihorac, Parisa Rashidi
Our research fills these gaps in the existing literature by dynamically predicting delirium, coma, and mortality for 12-hour intervals throughout an ICU stay and validating on two public datasets.
no code implementations • 10 Mar 2024 • Scott Siegel, Jiaqing Zhang, Sabyasachi Bandyopadhyay, Subhash Nerella, Brandon Silva, Tezcan Baslanti, Azra Bihorac, Parisa Rashidi
Likewise, while mobility can be an important indicator of recovery or deterioration in ICU patients, it is only captured sporadically or not captured at all.
no code implementations • 6 Mar 2024 • Yingbo Ma, Suraj Kolla, Dhruv Kaliraman, Victoria Nolan, Zhenhong Hu, Ziyuan Guan, Yuanfang Ren, Brooke Armfield, Tezcan Ozrazgat-Baslanti, Tyler J. Loftus, Parisa Rashidi, Azra Bihorac, Benjamin Shickel
The breadth, scale, and temporal granularity of modern electronic health records (EHR) systems offers great potential for estimating personalized and contextual patient health trajectories using sequential deep learning.
no code implementations • 6 Feb 2024 • Esra Adiyeke, Yuanfang Ren, Benjamin Shickel, Matthew M. Ruppert, Ziyuan Guan, Sandra L. Kane-Gill, Raghavan Murugan, Nabihah Amatullah, Britney A. Stottlemyer, Tiffany L. Tran, Dan Ricketts, Christopher M Horvat, Parisa Rashidi, Azra Bihorac, Tezcan Ozrazgat-Baslanti
We trained local models for each site (UFH Model trained on UFH, UPMC Model trained on UPMC) and a separate model with a development cohort of patients from both sites (UFH-UPMC Model).
no code implementations • 3 Nov 2023 • Jessica Sena, Mohammad Tahsin Mostafiz, Jiaqing Zhang, Andrea Davidson, Sabyasachi Bandyopadhyay, Ren Yuanfang, Tezcan Ozrazgat-Baslanti, Benjamin Shickel, Tyler Loftus, William Robson Schwartz, Azra Bihorac, Parisa Rashidi
In this study, we evaluated the impact of integrating mobility data collected from wrist-worn accelerometers with clinical data obtained from EHR for developing an AI-driven acuity assessment score.
no code implementations • 3 Nov 2023 • Miguel Contreras, Brandon Silva, Benjamin Shickel, Tezcan Ozrazgat-Baslanti, Yuanfang Ren, Ziyuan Guan, Jeremy Balch, Jiaqing Zhang, Sabyasachi Bandyopadhyay, Kia Khezeli, Azra Bihorac, Parisa Rashidi
The acuity state of patients in the intensive care unit (ICU) can quickly change from stable to unstable.
no code implementations • 1 Nov 2023 • Subhash Nerella, Ziyuan Guan, Andrea Davidson, Yuanfang Ren, Tezcan Baslanti, Brooke Armfield, Patrick Tighe, Azra Bihorac, Parisa Rashidi
We leveraged our AU-ICU dataset with 107, 064 frames collected in the ICU annotated with facial action units (AUs) labels by trained annotators.
no code implementations • 27 Jul 2023 • Yuanfang Ren, Yanjun Li, Tyler J. Loftus, Jeremy Balch, Kenneth L. Abbott, Shounak Datta, Matthew M. Ruppert, Ziyuan Guan, Benjamin Shickel, Parisa Rashidi, Tezcan Ozrazgat-Baslanti, Azra Bihorac
With clustering analysis for vital signs within six hours of admission, patient phenotypes with distinct pathophysiological signatures and outcomes may support early clinical decisions.
no code implementations • 30 Jun 2023 • Subhash Nerella, Sabyasachi Bandyopadhyay, Jiaqing Zhang, Miguel Contreras, Scott Siegel, Aysegul Bumin, Brandon Silva, Jessica Sena, Benjamin Shickel, Azra Bihorac, Kia Khezeli, Parisa Rashidi
With Artificial Intelligence (AI) increasingly permeating various aspects of society, including healthcare, the adoption of the Transformers neural network architecture is rapidly changing many applications.
no code implementations • 13 Mar 2023 • Brandon Silva, Miguel Contreras, Tezcan Ozrazgat Baslanti, Yuanfang Ren, Guan Ziyuan, Kia Khezeli, Azra Bihorac, Parisa Rashidi
In this work, we develop a machine learning system for real-time prediction of ADB using Electronic Health Record (HER) data.
no code implementations • 11 Mar 2023 • Sabyasachi Bandyopadhyay, Ahna Cecil, Jessica Sena, Andrea Davidson, Ziyuan Guan, Subhash Nerella, Jiaqing Zhang, Kia Khezeli, Brooke Armfield, Azra Bihorac, Parisa Rashidi
This study shows that ambient light and noise intensities are strong predictors of long-term delirium incidence in the ICU.
no code implementations • 11 Mar 2023 • Subhash Nerella, Ziyuan Guan, Scott Siegel, Jiaqing Zhang, Kia Khezeli, Azra Bihorac, Parisa Rashidi
However, the extent of patient monitoring in the ICU is limited due to time constraints and the workload on healthcare providers.
no code implementations • 9 Mar 2023 • Yuanfang Ren, Tyler J. Loftus, Ziyuan Guan, Rayon Uddin, Benjamin Shickel, Carolina B. Maciel, Katharina Busl, Parisa Rashidi, Azra Bihorac, Tezcan Ozrazgat-Baslanti
We developed algorithms to quantify acute brain dysfunction status including coma, delirium, normal, or death at 12-hour intervals of each ICU admission and to identify acute brain dysfunction phenotypes using continuous acute brain dysfunction status and k-means clustering approach.
no code implementations • 8 Mar 2023 • Esra Adiyeke, Yuanfang Ren, Ziyuan Guan, Matthew M. Ruppert, Parisa Rashidi, Azra Bihorac, Tezcan Ozrazgat-Baslanti
At 14 days following Stage 1 AKI, patients with more frail conditions (Charlson comorbidity index greater than or equal to 3 and had prolonged ICU stay) had lower proportion of transitioning to No AKI or discharge states.
no code implementations • 12 Nov 2022 • Subhash Nerella, Kia Khezeli, Andrea Davidson, Patrick Tighe, Azra Bihorac, Parisa Rashidi
In this work, we evaluated two vision transformer models, namely ViT and SWIN, for AU detection on our Pain-ICU dataset and also external datasets.
no code implementations • 9 Nov 2021 • Benjamin Shickel, Patrick J. Tighe, Azra Bihorac, Parisa Rashidi
Recent deep learning research based on Transformer model architectures has demonstrated state-of-the-art performance across a variety of domains and tasks, mostly within the computer vision and natural language processing domains.
no code implementations • 4 Oct 2021 • Anis Davoudi, Patrick J. Tighe, Azra Bihorac, Parisa Rashidi
Low physical activity levels in the intensive care units (ICU) patients have been linked to adverse clinical outcomes.
no code implementations • 27 Apr 2020 • Yanjun Li, Yuanfang Ren, Tyler J. Loftus, Shounak Datta, M. Ruppert, Ziyuan Guan, Dapeng Wu, Parisa Rashidi, Tezcan Ozrazgat-Baslanti, Azra Bihorac
M Interpretation: In a heterogeneous cohort of hospitalized patients, a deep interpolation network extracted representations from vital sign data measured within six hours of hospital admission.
no code implementations • 27 Apr 2020 • Benjamin Shickel, Tyler J. Loftus, Matthew Ruppert, Gilbert R. Upchurch, Tezcan Ozrazgat-Baslanti, Parisa Rashidi, Azra Bihorac
In a longitudinal cohort study of 56, 242 patients undergoing 67, 481 inpatient surgical procedures at a university medical center, we compared deep learning models with random forests for predicting nine common postoperative complications using preoperative, intraoperative, and perioperative patient data.
no code implementations • 27 Apr 2020 • Yuanfang Ren, Jeremy Balch, Kenneth L. Abbott, Tyler J. Loftus, Benjamin Shickel, Parisa Rashidi, Azra Bihorac, Tezcan Ozrazgat-Baslanti
We gathered two single-center, longitudinal electronic health record datasets for 51, 372 adult ICU patients admitted to the University of Florida Health (UFH) Gainesville (GNV) and Jacksonville (JAX).
no code implementations • 24 Apr 2020 • Subhash Nerella, Azra Bihorac, Patrick Tighe, Parisa Rashidi
Previous studies showed the feasibility of automatic pain assessment by detecting Facial Action Units (AUs).
no code implementations • 21 Apr 2020 • Vasundhra Iyengar, Azra Bihorac, Parisa Rashidi
Sleep has been shown to be an indispensable and important component of patients recovery process.
no code implementations • 20 Apr 2020 • Florenc Demrozi, Graziano Pravadelli, Patrick J. Tighe, Azra Bihorac, Parisa Rashidi
Pain and physical function are both essential indices of recovery in critically ill patients in the Intensive Care Units (ICU).
no code implementations • 19 Apr 2020 • Florenc Demrozi, Graziano Pravadelli, Azra Bihorac, Parisa Rashidi
In the last decade, Human Activity Recognition (HAR) has become a vibrant research area, especially due to the spread of electronic devices such as smartphones, smartwatches and video cameras present in our daily lives.
no code implementations • 11 May 2018 • Lasith Adhikari, Tezcan Ozrazgat-Baslanti, Paul Thottakkara, Ashkan Ebadi, Amir Motaei, Parisa Rashidi, Xiaolin Li, Azra Bihorac
We used machine learning and statistical analysis techniques to develop perioperative models to predict the risk of AKI (risk during the first 3 days, 7 days, and until the discharge day) before and after the surgery.
no code implementations • 26 Apr 2018 • Anton Kocheturov, Petar Momcilovic, Azra Bihorac, Panos M. Pardalos
We develop a new method called the Fast Temporal Pattern Mining with Extended Vertical Lists.
no code implementations • 25 Apr 2018 • Anis Davoudi, Kumar Rohit Malhotra, Benjamin Shickel, Scott Siegel, Seth Williams, Matthew Ruppert, Emel Bihorac, Tezcan Ozrazgat-Baslanti, Patrick J. Tighe, Azra Bihorac, Parisa Rashidi
In this pilot study, we examined the feasibility of using pervasive sensing technology and artificial intelligence for autonomous and granular monitoring of critically ill patients and their environment in the Intensive Care Unit (ICU).
no code implementations • 28 Feb 2018 • Benjamin Shickel, Tyler J. Loftus, Lasith Adhikari, Tezcan Ozrazgat-Baslanti, Azra Bihorac, Parisa Rashidi
Traditional methods for assessing illness severity and predicting in-hospital mortality among critically ill patients require time-consuming, error-prone calculations using static variable thresholds.
no code implementations • 12 Jun 2017 • Benjamin Shickel, Patrick Tighe, Azra Bihorac, Parisa Rashidi
The past decade has seen an explosion in the amount of digital information stored in electronic health records (EHR).