no code implementations • 31 Jul 2023 • Diana Waldmannstetter, Benedikt Wiestler, Julian Schwarting, Ivan Ezhov, Marie Metz, Spyridon Bakas, Bhakti Baheti, Satrajit Chakrabarty, Jan S. Kirschke, Rolf A. Heckemann, Marie Piraud, Florian Kofler, Bjoern H. Menze
Nowadays, registration methods are typically evaluated based on sub-resolution tracking error differences.
1 code implementation • 29 May 2023 • Shubham Innani, Prasad Dutande, Ujjwal Baid, Venu Pokuri, Spyridon Bakas, Sanjay Talbar, Bhakti Baheti, Sharath Chandra Guntuku
Skin cancer is a serious condition that requires accurate diagnosis and treatment.
no code implementations • 4 Apr 2023 • Diana Waldmannstetter, Benedikt Wiestler, Julian Schwarting, Ivan Ezhov, Marie Metz, Spyridon Bakas, Bhakti Baheti, Satrajit Chakrabarty, Daniel Rueckert, Jan S. Kirschke, Rolf A. Heckemann, Marie Piraud, Bjoern H. Menze, Florian Kofler
Even though simultaneous optimization of similarity metrics is a standard procedure in the field of semantic segmentation, surprisingly, this is much less established for image registration.
no code implementations • 1 Feb 2023 • Bhakti Baheti, Sunny Rai, Shubham Innani, Garv Mehdiratta, Sharath Chandra Guntuku, MacLean P. Nasrallah, Spyridon Bakas
Glioblastoma is the most common and aggressive malignant adult tumor of the central nervous system, with a grim prognosis and heterogeneous morphologic and molecular profiles.
no code implementations • 16 Jan 2023 • Shubham Innani, Prasad Dutande, Bhakti Baheti, Ujjwal Baid, Sanjay Talbar
We explored the effectiveness of deep convolutional neural network based architectures by designing an encoder-decoder architecture for skin lesion segmentation and CNN based classification network.
no code implementations • 13 Dec 2021 • Bhakti Baheti, Satrajit Chakrabarty, Hamed Akbari, Michel Bilello, Benedikt Wiestler, Julian Schwarting, Evan Calabrese, Jeffrey Rudie, Syed Abidi, Mina Mousa, Javier Villanueva-Meyer, Brandon K. K. Fields, Florian Kofler, Russell Takeshi Shinohara, Juan Eugenio Iglesias, Tony C. W. Mok, Albert C. S. Chung, Marek Wodzinski, Artur Jurgas, Niccolo Marini, Manfredo Atzori, Henning Muller, Christoph Grobroehmer, Hanna Siebert, Lasse Hansen, Mattias P. Heinrich, Luca Canalini, Jan Klein, Annika Gerken, Stefan Heldmann, Alessa Hering, Horst K. Hahn, Mingyuan Meng, Lei Bi, Dagan Feng, Jinman Kim, Ramy A. Zeineldin, Mohamed E. Karar, Franziska Mathis-Ullrich, Oliver Burgert, Javid Abderezaei, Aymeric Pionteck, Agamdeep Chopra, Mehmet Kurt, Kewei Yan, Yonghong Yan, Zhe Tang, Jianqiang Ma, Sahar Almahfouz Nasser, Nikhil Cherian Kurian, Mohit Meena, Saqib Shamsi, Amit Sethi, Nicholas J. Tustison, Brian B. Avants, Philip Cook, James C. Gee, Lin Tian, Hastings Greer, Marc Niethammer, Andrew Hoopes, Malte Hoffmann, Adrian V. Dalca, Stergios Christodoulidis, Theo Estiene, Maria Vakalopoulou, Nikos Paragios, Daniel S. Marcus, Christos Davatzikos, Aristeidis Sotiras, Bjoern Menze, Spyridon Bakas, Diana Waldmannstetter
Registration of longitudinal brain MRI scans containing pathologies is challenging due to dramatic changes in tissue appearance.
1 code implementation • 26 Feb 2021 • Sarthak Pati, Siddhesh P. Thakur, İbrahim Ethem Hamamcı, Ujjwal Baid, Bhakti Baheti, Megh Bhalerao, Orhun Güley, Sofia Mouchtaris, David Lang, Spyridon Thermos, Karol Gotkowski, Camila González, Caleb Grenko, Alexander Getka, Brandon Edwards, Micah Sheller, Junwen Wu, Deepthi Karkada, Ravi Panchumarthy, Vinayak Ahluwalia, Chunrui Zou, Vishnu Bashyam, Yuemeng Li, Babak Haghighi, Rhea Chitalia, Shahira Abousamra, Tahsin M. Kurc, Aimilia Gastounioti, Sezgin Er, Mark Bergman, Joel H. Saltz, Yong Fan, Prashant Shah, Anirban Mukhopadhyay, Sotirios A. Tsaftaris, Bjoern Menze, Christos Davatzikos, Despina Kontos, Alexandros Karargyris, Renato Umeton, Peter Mattson, Spyridon Bakas
Deep Learning (DL) has the potential to optimize machine learning in both the scientific and clinical communities.
1 code implementation • 21 Apr 2020 • Mang Tik Chiu, Xingqian Xu, Kai Wang, Jennifer Hobbs, Naira Hovakimyan, Thomas S. Huang, Honghui Shi, Yunchao Wei, Zilong Huang, Alexander Schwing, Robert Brunner, Ivan Dozier, Wyatt Dozier, Karen Ghandilyan, David Wilson, Hyunseong Park, Junhee Kim, Sungho Kim, Qinghui Liu, Michael C. Kampffmeyer, Robert Jenssen, Arnt B. Salberg, Alexandre Barbosa, Rodrigo Trevisan, Bingchen Zhao, Shaozuo Yu, Siwei Yang, Yin Wang, Hao Sheng, Xiao Chen, Jingyi Su, Ram Rajagopal, Andrew Ng, Van Thong Huynh, Soo-Hyung Kim, In-Seop Na, Ujjwal Baid, Shubham Innani, Prasad Dutande, Bhakti Baheti, Sanjay Talbar, Jianyu Tang
The first Agriculture-Vision Challenge aims to encourage research in developing novel and effective algorithms for agricultural pattern recognition from aerial images, especially for the semantic segmentation task associated with our challenge dataset.