Search Results for author: Busra Celikkaya

Found 6 papers, 0 papers with code

Towards User Friendly Medication Mapping Using Entity-Boosted Two-Tower Neural Network

no code implementations17 Jun 2020 Shaoqing Yuan, Parminder Bhatia, Busra Celikkaya, Haiyang Liu, Kyunghwan Choi

Medication name inference is the task of mapping user friendly medication names from a free-form text to a concept in a normalized medication list.

Clustering Descriptive +1

LATTE: Latent Type Modeling for Biomedical Entity Linking

no code implementations21 Nov 2019 Ming Zhu, Busra Celikkaya, Parminder Bhatia, Chandan K. Reddy

This is of significant importance in the biomedical domain, where it could be used to semantically annotate a large volume of clinical records and biomedical literature, to standardized concepts described in an ontology such as Unified Medical Language System (UMLS).

Entity Disambiguation Entity Linking +1

Comprehend Medical: a Named Entity Recognition and Relationship Extraction Web Service

no code implementations15 Oct 2019 Parminder Bhatia, Busra Celikkaya, Mohammed Khalilia, Selvan Senthivel

Comprehend Medical is a stateless and Health Insurance Portability and Accountability Act (HIPAA) eligible Named Entity Recognition (NER) and Relationship Extraction (RE) service launched under Amazon Web Services (AWS) trained using state-of-the-art deep learning models.

Anatomy named-entity-recognition +3

Dynamic Transfer Learning for Named Entity Recognition

no code implementations13 Dec 2018 Parminder Bhatia, Kristjan Arumae, Busra Celikkaya

We complement a standard hierarchical NER model with a general transfer learning framework consisting of parameter sharing between the source and target tasks, and showcase scores significantly above the baseline architecture.

Model Optimization named-entity-recognition +3

Joint Entity Extraction and Assertion Detection for Clinical Text

no code implementations ACL 2019 Parminder Bhatia, Busra Celikkaya, Mohammed Khalilia

Most of the existing systems treat this task as a pipeline of two separate tasks, i. e., named entity recognition (NER) and rule-based negation detection.

Entity Extraction using GAN named-entity-recognition +4

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