Assessing Engraftment Following Fecal Microbiota Transplant

no code implementations • 10 Apr 2024 • Chloe Herman, Bridget M. Barker, Thais F. Bartelli, Vidhi Chandra, Rosa Krajmalnik-Brown, Mary Jewell, Le Li, Chen Liao, Florencia McAllister, Khemlal Nirmalkar, Joao B. Xavier, J. Gregory Caporaso

Quantifying the extent of engraftment following an FMT is important in determining if a recipient didn't respond because the engrafted microbiome didn't produce the desired outcomes (a successful FMT, but negative treatment outcome), or the microbiome didn't engraft (an unsuccessful FMT and negative treatment outcome).

A Small and Fast BERT for Chinese Medical Punctuation Restoration

1 code implementation • 24 Aug 2023 • Tongtao Ling, Chen Liao, Zhipeng Yu, Lei Chen, Shilei Huang, Yi Liu

In clinical dictation, utterances after automatic speech recognition (ASR) without explicit punctuation marks may lead to the misunderstanding of dictated reports.

Automatic Speech Recognition Automatic Speech Recognition (ASR) +3

Modeling microbial cross-feeding at intermediate scale portrays community dynamics and species coexistence

no code implementations • 19 Feb 2020 • Chen Liao, Tong Wang, Sergei Maslov, Joao B. Xavier

We used the three models to study each community's limits of robustness to perturbations such as variations in resource supply, antibiotic treatments and invasion by other "cheaters" species.