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Found 4 papers, 1 papers with code
Wasserstein Wormhole: Scalable Optimal Transport Distance with Transformers
Along with an encoder that maps distributions to embeddings, Wasserstein Wormhole includes a decoder that maps embeddings back to distributions, allowing for operations in the embedding space to generalize to OT spaces, such as Wasserstein barycenter estimation and OT interpolation.
Gradient Estimation for Binary Latent Variables via Gradient Variance Clipping
Gradient estimation is often necessary for fitting generative models with discrete latent variables, in contexts such as reinforcement learning and variational autoencoder (VAE) training.
MITI Minimum Information guidelines for highly multiplexed tissue images
The imminent release of tissue atlases combining multi-channel microscopy with single cell sequencing and other omics data from normal and diseased specimens creates an urgent need for data and metadata standards that guide data deposition, curation and release.
A Nonparametric Multi-view Model for Estimating Cell Type-Specific Gene Regulatory Networks
We present a Bayesian hierarchical multi-view mixture model termed Symphony that simultaneously learns clusters of cells representing cell types and their underlying gene regulatory networks by integrating data from two views: single-cell gene expression data and paired epigenetic data, which is informative of gene-gene interactions.
