no code implementations • ECCV 2020 • Zudi Lin, Donglai Wei, Won-Dong Jang, Siyan Zhou, Xupeng Chen, Xueying Wang, Richard Schalek, Daniel Berger, Brian Matejek, Lee Kamentsky, Adi Peleg, Daniel Haehn, Thouis Jones, Toufiq Parag, Jeff Lichtman, Hanspeter Pfister
As a use case, we build an end-to-end active learning framework with our query suggestion method for 3D synapse detection and mitochondria segmentation in connectomics.
no code implementations • 19 Apr 2024 • Shixuan Gu, Jason Ken Adhinarta, Mikhail Bessmeltsev, Jiancheng Yang, Jessica Zhang, Daniel Berger, Jeff W. Lichtman, Hanspeter Pfister, Donglai Wei
In this work, we propose FreSeg, a framework of part segmentation tasks for 3D curvilinear structures.
1 code implementation • 8 Jul 2018 • Toufiq Parag, Daniel Berger, Lee Kamentsky, Benedikt Staffler, Donglai Wei, Moritz Helmstaedter, Jeff W. Lichtman, Hanspeter Pfister
The few methods that computes direction along with contact location have only been demonstrated to work on either dyadic (most common in vertebrate brain) or polyadic (found in fruit fly brain) synapses, but not on both types.
no code implementations • 21 Nov 2016 • Seymour Knowles-Barley, Verena Kaynig, Thouis Ray Jones, Alyssa Wilson, Joshua Morgan, Dongil Lee, Daniel Berger, Narayanan Kasthuri, Jeff W. Lichtman, Hanspeter Pfister
The best segmentation results obtained gave $V^\text{Info}_\text{F-score}$ scores of 0. 9054 and 09182 for the cortex datasets, 0. 9438 for LGN, and 0. 9150 for Cerebellum.