Search Results for author: Danielle S. Bassett

Found 23 papers, 6 papers with code

Analytical Characterization of Epileptic Dynamics in a Bistable System

no code implementations4 Apr 2024 Yuzhen Qin, Ahmed El-Gazzar, Danielle S. Bassett, Fabio Pasqualetti, Marcel van Gerven

In this paper, we employ a bistable model, where a stable equilibrium and a stable limit cycle coexist, to describe epileptic dynamics.

Structural underpinnings of control in multiplex networks

no code implementations15 Mar 2021 Pragya Srivastava, Peter J. Mucha, Emily Falk, Fabio Pasqualetti, Danielle S. Bassett

For this purpose, we calculate the exact expression of optimal control energy in terms of layer spectra and the relative alignment between the eigenmodes of the input layer and the deeper target layer.

Network structure and dynamics of effective models of non-equilibrium quantum transport

no code implementations12 Jan 2021 Abigail N. Poteshman, Mathieu Ouellet, Lee C. Bassett, Danielle S. Bassett

To elucidate and address this challenge, we study networks that represent non-equilibrium quantum-electronic transport through quantum antidot devices -- an example of an open, mesoscopic quantum system.

Mesoscale and Nanoscale Physics

Variability in higher order structure of noise added to weighted networks

1 code implementation11 Jan 2021 Ann S. Blevins, Jason Z. Kim, Danielle S. Bassett

We address this problem by examining the higher-order structure of noisy, weak edges added to model networks.

Management

The growing topology of the C. elegans connectome

no code implementations31 Dec 2020 Alec Helm, Ann S. Blevins, Danielle S. Bassett

Our results suggest that the connectomes growing topology is a robust feature of the developing connectome that is distinct from other network properties, and that the growing topology is particularly sensitive to the exact birth times of a small set of predominantly motor neurons.

Improving J-divergence of brain connectivity states by graph Laplacian denoising

no code implementations21 Dec 2020 Tiziana Cattai, Gaetano Scarano, Marie-Constance Corsi, Danielle S. Bassett, Fabrizio De Vico Fallani, Stefania Colonnese

Using our novel formulation of the J-divergence, we are able to quantify the distance between the FC networks in the motor imagery and resting states, as well as to understand the contribution of each Laplacian variable to the total J-divergence between two states.

Connectivity Estimation Denoising +2

Phase-Amplitude Coupling in Neuronal Oscillator Networks

no code implementations8 Dec 2020 Yuzhen Qin, Tommaso Menara, Danielle S. Bassett, Fabio Pasqualetti

Phase-amplitude coupling (PAC) describes the phenomenon where the power of a high-frequency oscillation evolves with the phase of a low-frequency one.

The network structure of scientific revolutions

1 code implementation16 Oct 2020 Harang Ju, Dale Zhou, Ann S. Blevins, David M. Lydon-Staley, Judith Kaplan, Julio R. Tuma, Danielle S. Bassett

Philosophers of science have long postulated how collective scientific knowledge grows.

Digital Libraries History and Philosophy of Physics

The growth and form of knowledge networks by kinesthetic curiosity

no code implementations4 Jun 2020 Dale Zhou, David M. Lydon-Staley, Perry Zurn, Danielle S. Bassett

The practice of curiosity can be viewed as an extended and open-ended search for valuable information with hidden identity and location in a complex space of interconnected information.

Model-based Reinforcement Learning Philosophy

The why, how, and when of representations for complex systems

no code implementations4 Jun 2020 Leo Torres, Ann S. Blevins, Danielle S. Bassett, Tina Eliassi-Rad

At each step we consider different types of \emph{dependencies}; these are properties of the system that describe how the existence of one relation among the parts of a system may influence the existence of another relation.

Social and Information Networks Discrete Mathematics Quantitative Methods 68R10

Teaching Recurrent Neural Networks to Modify Chaotic Memories by Example

no code implementations3 May 2020 Jason Z. Kim, Zhixin Lu, Erfan Nozari, George J. Pappas, Danielle S. Bassett

Here we demonstrate that a recurrent neural network (RNN) can learn to modify its representation of complex information using only examples, and we explain the associated learning mechanism with new theory.

Time Series Time Series Analysis

Path-dependent connectivity, not modularity, consistently predicts controllability of structural brain networks

no code implementations16 Feb 2020 Shubhankar P. Patankar, Jason Z. Kim, Fabio Pasqualetti, Danielle S. Bassett

Yet, the precise relationship between community structure in structural brain networks and the communication dynamics that can emerge therefrom is not well-understood.

Efficient Coding in the Economics of Human Brain Connectomics

1 code implementation14 Jan 2020 Dale Zhou, Christopher W. Lynn, Zaixu Cui, Rastko Ciric, Graham L. Baum, Tyler M. Moore, David R. Roalf, John A. Detre, Ruben C. Gur, Raquel E. Gur, Theodore D. Satterthwaite, Danielle S. Bassett

In doing so, we introduce the metric of compression efficiency, which quantifies the trade-off between lossy compression and transmission fidelity in structural networks.

Phase/amplitude synchronization of brain signals during motor imagery BCI tasks

no code implementations5 Dec 2019 Tiziana Cattai, Stefania Colonnese, Marie-Constance Corsi, Danielle S. Bassett, Gaetano Scarano, Fabrizio De Vico Fallani

In the last decade, functional connectivity (FC) estimators have been increasingly explored based on their ability to capture synchronization between multivariate brain signals.

EEG Motor Imagery

Linear Dynamics & Control of Brain Networks

1 code implementation8 Feb 2019 Jason Z. Kim, Danielle S. Bassett

The brain is an intricately structured organ responsible for the rich emergent dynamics that support the complex cognitive functions we enjoy as humans.

Influence of Neighborhood SES on Functional Brain Network Development

no code implementations20 Jul 2018 Ursula A. Tooley, Allyson P. Mackey, Rastko Ciric, Kosha Ruparel, Tyler M. Moore, Ruben C. Gur, Raquel E. Gur, Theodore D. Satterthwaite, Danielle S. Bassett

We quantitatively characterize this topology using a local measure of network segregation known as the clustering coefficient, and find that it accounts for a greater degree of SES-associated variance than meso-scale segregation captured by modularity.

Neurons and Cognition

Structure from noise: Mental errors yield abstract representations of events

no code implementations31 May 2018 Christopher W. Lynn, Ari E. Kahn, Danielle S. Bassett

Humans are adept at uncovering abstract associations in the world around them, yet the underlying mechanisms remain poorly understood.

Two's company, three (or more) is a simplex: Algebraic-topological tools for understanding higher-order structure in neural data

no code implementations7 Jan 2016 Chad Giusti, Robert Ghrist, Danielle S. Bassett

Specifically, we explore the use of \emph{simplicial complexes}, a theoretical notion developed in the field of mathematics known as algebraic topology, which is now becoming applicable to real data due to a rapidly growing computational toolset.

Neurons and Cognition Algebraic Topology Quantitative Methods 92-02, 92B20, 57Q05

Small-World Propensity in Weighted, Real-World Networks

1 code implementation8 May 2015 Sarah Feldt Muldoon, Eric W. Bridgeford, Danielle S. Bassett

Quantitative descriptions of network structure in big data can provide fundamental insights into the function of interconnected complex systems.

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