no code implementations • 9 Mar 2018 • Yuncong Chen, David Kleinfeld, Martyn Goulding, Yoav Freund
In this work we describe the first steps in developing a semi-automated system to construct a histology at- las of mouse brainstem that combines atlas-guided annotation, landmark-based registration and atlas generation in an iterative framework.
no code implementations • 28 Feb 2017 • Yuncong Chen, Lauren McElvain, Alex Tolpygo, Daniel Ferrante, Harvey Karten, Partha Mitra, David Kleinfeld, Yoav Freund
We have developed a digital atlas methodology that combines information about the 3D organization of the brain and the detailed texture of neurons in different structures.