2 code implementations • 27 Jul 2023 • Walter H. L. Pinaya, Mark S. Graham, Eric Kerfoot, Petru-Daniel Tudosiu, Jessica Dafflon, Virginia Fernandez, Pedro Sanchez, Julia Wolleb, Pedro F. da Costa, Ashay Patel, Hyungjin Chung, Can Zhao, Wei Peng, Zelong Liu, Xueyan Mei, Oeslle Lucena, Jong Chul Ye, Sotirios A. Tsaftaris, Prerna Dogra, Andrew Feng, Marc Modat, Parashkev Nachev, Sebastien Ourselin, M. Jorge Cardoso
We have implemented these models in a generalisable fashion, illustrating that their results can be extended to 2D or 3D scenarios, including medical images with different modalities (like CT, MRI, and X-Ray data) and from different anatomical areas.
no code implementations • 29 Dec 2022 • Vikash Gupta, Barbaros Selnur Erdal, Carolina Ramirez, Ralf Floca, Laurence Jackson, Brad Genereaux, Sidney Bryson, Christopher P Bridge, Jens Kleesiek, Felix Nensa, Rickmer Braren, Khaled Younis, Tobias Penzkofer, Andreas Michael Bucher, Ming Melvin Qin, Gigon Bae, Hyeonhoon Lee, M. Jorge Cardoso, Sebastien Ourselin, Eric Kerfoot, Rahul Choudhury, Richard D. White, Tessa Cook, David Bericat, Matthew Lungren, Risto Haukioja, Haris Shuaib
To address the barrier to clinical deployment, we have formed MONAI Consortium, an open-source community which is building standards for AI deployment in healthcare institutions, and developing tools and infrastructure to facilitate their implementation.
1 code implementation • 4 Nov 2022 • M. Jorge Cardoso, Wenqi Li, Richard Brown, Nic Ma, Eric Kerfoot, Yiheng Wang, Benjamin Murrey, Can Zhao, Dong Yang, Vishwesh Nath, Yufan He, Ziyue Xu, Ali Hatamizadeh, Andriy Myronenko, Wentao Zhu, Yun Liu, Mingxin Zheng, Yucheng Tang, Isaac Yang, Michael Zephyr, Behrooz Hashemian, Sachidanand Alle, Mohammad Zalbagi Darestani, Charlie Budd, Marc Modat, Tom Vercauteren, Guotai Wang, Yiwen Li, Yipeng Hu, Yunguan Fu, Benjamin Gorman, Hans Johnson, Brad Genereaux, Barbaros S. Erdal, Vikash Gupta, Andres Diaz-Pinto, Andre Dourson, Lena Maier-Hein, Paul F. Jaeger, Michael Baumgartner, Jayashree Kalpathy-Cramer, Mona Flores, Justin Kirby, Lee A. D. Cooper, Holger R. Roth, Daguang Xu, David Bericat, Ralf Floca, S. Kevin Zhou, Haris Shuaib, Keyvan Farahani, Klaus H. Maier-Hein, Stephen Aylward, Prerna Dogra, Sebastien Ourselin, Andrew Feng
For AI models to be used clinically, they need to be made safe, reproducible and robust, and the underlying software framework must be aware of the particularities (e. g. geometry, physiology, physics) of medical data being processed.
1 code implementation • 2 Nov 2020 • Benjamin Murray, Eric Kerfoot, Mark S. Graham, Carole H. Sudre, Erika Molteni, Liane S. Canas, Michela Antonelli, Kerstin Klaser, Alessia Visconti, Andrew T. Chan, Paul W. Franks, Richard Davies, Jonathan Wolf, Tim Spector, Claire J. Steves, Marc Modat, Sebastien Ourselin
We present ExeTera, an open source data curation software designed to address scalability challenges and to enable reproducible research across an international research group for datasets such as the Covid Symptom Study dataset.
no code implementations • 23 Oct 2020 • Eric Kerfoot, Carlos Escudero King, Tefvik Ismail, David Nordsletten, Renee Miller
This study used manual annotations of valve landmarks in standard 2-, 3- and 4-chamber long-axis images collected in clinical scans to train the network.
no code implementations • 1 Sep 2020 • Bram Ruijsink, Esther Puyol-Anton, Ye Li, Wenja Bai, Eric Kerfoot, Reza Razavi, Andrew P. King
SemiQCSeg can be an efficient approach for training segmentation networks for medical image data when labelled datasets are scarce.