Search Results for author: Fikret Aydin

Found 3 papers, 1 papers with code

Spectroscopy-Guided Discovery of Three-Dimensional Structures of Disordered Materials with Diffusion Models

1 code implementation9 Dec 2023 Hyuna Kwon, Tim Hsu, Wenyu Sun, Wonseok Jeong, Fikret Aydin, James Chapman, Xiao Chen, Matthew R. Carbone, Deyu Lu, Fei Zhou, Tuan Anh Pham

In this work, we introduce a new framework based on the diffusion model, a recent generative machine learning method to predict 3D structures of disordered materials from a target property.

Identifying Orientation-specific Lipid-protein Fingerprints using Deep Learning

no code implementations14 Jul 2022 Fikret Aydin, Konstantia Georgouli, Gautham Dharuman, James N. Glosli, Felice C. Lightstone, Helgi I. Ingólfsson, Peer-Timo Bremer, Harsh Bhatia

Improved understanding of the relation between the behavior of RAS and RAF proteins and the local lipid environment in the cell membrane is critical for getting insights into the mechanisms underlying cancer formation.

Emerging Patterns in the Continuum Representation of Protein-Lipid Fingerprints

no code implementations9 Jul 2022 Konstantia Georgouli, Helgi I Ingólfsson, Fikret Aydin, Mark Heimann, Felice C Lightstone, Peer-Timo Bremer, Harsh Bhatia

Capturing intricate biological phenomena often requires multiscale modeling where coarse and inexpensive models are developed using limited components of expensive and high-fidelity models.

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