When are Deep Networks really better than Decision Forests at small sample sizes, and how?

2 code implementations • 31 Aug 2021 • Haoyin Xu, Kaleab A. Kinfu, Will LeVine, Sambit Panda, Jayanta Dey, Michael Ainsworth, Yu-Chung Peng, Madi Kusmanov, Florian Engert, Christopher M. White, Joshua T. Vogelstein, Carey E. Priebe

Empirically, we compare these two strategies on hundreds of tabular data settings, as well as several vision and auditory settings.

NucMM Dataset: 3D Neuronal Nuclei Instance Segmentation at Sub-Cubic Millimeter Scale

1 code implementation • 13 Jul 2021 • Zudi Lin, Donglai Wei, Mariela D. Petkova, Yuelong Wu, Zergham Ahmed, Krishna Swaroop K, Silin Zou, Nils Wendt, Jonathan Boulanger-Weill, Xueying Wang, Nagaraju Dhanyasi, Ignacio Arganda-Carreras, Florian Engert, Jeff Lichtman, Hanspeter Pfister

Segmenting 3D cell nuclei from microscopy image volumes is critical for biological and clinical analysis, enabling the study of cellular expression patterns and cell lineages.

Instance Segmentation Representation Learning +1

Point process latent variable models of larval zebrafish behavior

no code implementations • NeurIPS 2018 • Anuj Sharma, Robert Johnson, Florian Engert, Scott Linderman

However, these sequences of swim bouts belie a set of discrete and continuous internal states, latent variables that are not captured by standard point process models.

Variational Inference

NeuroStorm: Accelerating Brain Science Discovery in the Cloud

no code implementations • 9 Mar 2018 • Gregory Kiar, Robert J. Anderson, Alex Baden, Alexandra Badea, Eric W. Bridgeford, Andrew Champion, Vikram Chandrashekhar, Forrest Collman, Brandon Duderstadt, Alan C. Evans, Florian Engert, Benjamin Falk, Tristan Glatard, William R. Gray Roncal, David N. Kennedy, Jeremy Maitin-Shepard, Ryan A. Marren, Onyeka Nnaemeka, Eric Perlman, Sharmishtaas Seshamani, Eric T. Trautman, Daniel J. Tward, Pedro Antonio Valdés-Sosa, Qing Wang, Michael I. Miller, Randal Burns, Joshua T. Vogelstein

Neuroscientists are now able to acquire data at staggering rates across spatiotemporal scales.