SciFive: a text-to-text transformer model for biomedical literature

1 code implementation • 28 May 2021 • Long N. Phan, James T. Anibal, Hieu Tran, Shaurya Chanana, Erol Bahadroglu, Alec Peltekian, Grégoire Altan-Bonnet

In this report, we introduce SciFive, a domain-specific T5 model that has been pre-trained on large biomedical corpora.

Document Classification Drug–drug Interaction Extraction +6

Quantitative Immunology for Physicists

no code implementations • 8 Jul 2019 • Grégoire Altan-Bonnet, Thierry Mora, Aleksandra M. Walczak

The adaptive immune system is a dynamical, self-organized multiscale system that protects vertebrates from both pathogens and internal irregularities, such as tumours.

Universality of biochemical feedback and its application to immune cells

1 code implementation • 12 Mar 2017 • Amir Erez, Tommy A. Byrd, Robert M. Vogel, Grégoire Altan-Bonnet, Andrew Mugler

We make rigorous the notion of universality in well-mixed stochastic models of biochemical feedback, namely that they scale near their bifurcation point according to the exponents of the mean-field Ising universality class.

Biological Physics Molecular Networks