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Found 6 papers, 2 papers with code
ntLink: a toolkit for de novo genome assembly scaffolding and mapping using long reads
ntLink is a flexible and resource-efficient genome scaffolding tool that utilizes long-read sequencing data to improve upon draft genome assemblies built from any sequencing technologies, including the same long reads.
GapPredict: A Language Model for Resolving Gaps in Draft Genome Assemblies
Short-read DNA sequencing instruments can yield over 1e+12 bases per run, typically composed of reads 150 bases long.
Interactive SARS-CoV-2 mutation timemaps
As the year 2020 draws to an end, several new strains have been reported for the SARS-CoV-2 coronavirus, the agent responsible for the COVID-19 pandemic that has afflicted us all this past year.
HLA predictions from the bronchoalveolar lavage fluid samples of five patients at the early stage of the Wuhan seafood market COVID-19 outbreak
We are in the midst of a global viral pandemic, one with no cure and a high mortality rate.
In-domain Context-aware Token Embeddings Improve Biomedical Named Entity Recognition
Here we report on a pipeline built on Embeddings from Language Models (ELMo) and a deep learning package for natural language processing (AllenNLP).
