1 code implementation • 10 May 2022 • Linh Huynh, Jacob G. Scott, Peter J. Thomas
Typically, we can only measure net growth rates, but the underlying density-dependent mechanisms that give rise to the observed dynamics can manifest in birth processes, death processes, or both.
2 code implementations • 8 Dec 2019 • Shamreen Iram, Emily Dolson, Joshua Chiel, Julia Pelesko, Nikhil Krishnan, Özenç Güngör, Benjamin Kuznets-Speck, Sebastian Deffner, Efe Ilker, Jacob G. Scott, Michael Hinczewski
The pace and unpredictability of evolution are critically relevant in a variety of modern challenges: combating drug resistance in pathogens and cancer, understanding how species respond to environmental perturbations like climate change, and developing artificial selection approaches for agriculture.
Statistical Mechanics Populations and Evolution
1 code implementation • 11 Dec 2018 • Raoul R. Wadhwa, Andrew Dhawan, Drew F. K. Williamson, Jacob G. Scott
Visualization in the emerging field of topological data analysis has progressed from persistence barcodes and persistence diagrams to display of two-parameter persistent homology.
Applications
1 code implementation • 5 Dec 2018 • Mark Gluzman, Jacob G. Scott, Alexander Vladimirsky
In particular, we optimize the total drug usage and time to recovery by solving a Hamilton-Jacobi-Bellman equation based on a mathematical model of tumor evolution.
Quantitative Methods 92C50, 49N90, 49Lxx