Search Results for author: Jason Holmes

Found 10 papers, 2 papers with code

The Radiation Oncology NLP Database

1 code implementation19 Jan 2024 Zhengliang Liu, Jason Holmes, Wenxiong Liao, Chenbin Liu, Lian Zhang, Hongying Feng, Peilong Wang, Muhammad Ali Elahi, Hongmin Cai, Lichao Sun, Quanzheng Li, Xiang Li, Tianming Liu, Jiajian Shen, Wei Liu

ROND is specifically designed to address this gap in the domain of radiation oncology, a field that offers many opportunities for NLP exploration.

Language Modelling Large Language Model +7

Evaluating multiple large language models in pediatric ophthalmology

no code implementations7 Nov 2023 Jason Holmes, Rui Peng, Yiwei Li, Jinyu Hu, Zhengliang Liu, Zihao Wu, Huan Zhao, Xi Jiang, Wei Liu, Hong Wei, Jie Zou, Tianming Liu, Yi Shao

IMPORTANCE The response effectiveness of different large language models (LLMs) and various individuals, including medical students, graduate students, and practicing physicians, in pediatric ophthalmology consultations, has not been clearly established yet.

Multiple-choice

Evaluating Large Language Models in Ophthalmology

no code implementations7 Nov 2023 Jason Holmes, Shuyuan Ye, Yiwei Li, Shi-Nan Wu, Zhengliang Liu, Zihao Wu, Jinyu Hu, Huan Zhao, Xi Jiang, Wei Liu, Hong Wei, Jie Zou, Tianming Liu, Yi Shao

Methods: A 100-item ophthalmology single-choice test was administered to three different LLMs (GPT-3. 5, GPT-4, and PaLM2) and three different professional levels (medical undergraduates, medical masters, and attending physicians), respectively.

Decision Making

Evaluating the Potential of Leading Large Language Models in Reasoning Biology Questions

no code implementations5 Nov 2023 Xinyu Gong, Jason Holmes, Yiwei Li, Zhengliang Liu, Qi Gan, Zihao Wu, Jianli Zhang, Yusong Zou, Yuxi Teng, Tian Jiang, Hongtu Zhu, Wei Liu, Tianming Liu, Yajun Yan

Recent advances in Large Language Models (LLMs) have presented new opportunities for integrating Artificial General Intelligence (AGI) into biological research and education.

Logical Reasoning Multiple-choice

Benchmarking a foundation LLM on its ability to re-label structure names in accordance with the AAPM TG-263 report

no code implementations5 Oct 2023 Jason Holmes, Lian Zhang, Yuzhen Ding, Hongying Feng, Zhengliang Liu, Tianming Liu, William W. Wong, Sujay A. Vora, Jonathan B. Ashman, Wei Liu

Conclusions: Given the accuracy of GPT-4 in re-labeling structure names of both target volumes and normal tissues as presented in this work, LLMs are poised to be the preferred method for standardizing structure names in radiation oncology, especially considering the rapid advancements in LLM capabilities that are likely to continue.

Benchmarking

Segment Anything Model (SAM) for Radiation Oncology

no code implementations20 Jun 2023 Lian Zhang, Zhengliang Liu, Lu Zhang, Zihao Wu, Xiaowei Yu, Jason Holmes, Hongying Feng, Haixing Dai, Xiang Li, Quanzheng Li, Dajiang Zhu, Tianming Liu, Wei Liu

Given that SAM, a model pre-trained purely on natural images, can handle the delineation of OARs from medical images with clinically acceptable accuracy, these results highlight SAM's robust generalization capabilities with consistent accuracy in automatic segmentation for radiotherapy.

Segmentation

Deep-Learning-based Fast and Accurate 3D CT Deformable Image Registration in Lung Cancer

no code implementations21 Apr 2023 Yuzhen Ding, Hongying Feng, Yunze Yang, Jason Holmes, Zhengliang Liu, David Liu, William W. Wong, Nathan Y. Yu, Terence T. Sio, Steven E. Schild, Baoxin Li, Wei Liu

Conclusion: A patient-specific vision-transformer-based network was developed and shown to be accurate and efficient to reconstruct 3D CT images from kV images.

Anatomy Image Registration

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