1 code implementation • 6 Oct 2022 • Xiajun Jiang, Zhiyuan Li, Ryan Missel, Md Shakil Zaman, Brian Zenger, Wilson W. Good, Rob S. MacLeod, John L. Sapp, Linwei Wang
As test time, metaPNS delivers a personalized neural surrogate by fast feed-forward embedding of a small and flexible number of data available from an individual, achieving -- for the first time -- personalization and surrogate construction for expensive simulations in one end-to-end learning framework.
no code implementations • 13 Oct 2021 • Md Shakil Zaman, Jwala Dhamala, Pradeep Bajracharya, John L. Sapp, B. Milan Horacek, Katherine C. Wu, Natalia A. Trayanova, Linwei Wang
In this paper, we present a Bayesian active learning method to directly approximate the posterior pdf function of cardiac model parameters, in which we intelligently select training points to query the simulation model in order to learn the posterior pdf using a small number of samples.
no code implementations • 2 Jun 2020 • Jwala Dhamala, John L. Sapp, B. Milan Horácek, Linwei Wang
However, by sampling from an approximation of the exact posterior probability density function (pdf) of the parameters, the efficiency is gained at the expense of sampling accuracy.
no code implementations • 15 May 2020 • Jwala Dhamala, Sandesh Ghimire, John L. Sapp, B. Milan Horácek, Linwei Wang
The estimation of patient-specific tissue properties in the form of model parameters is important for personalized physiological models.
1 code implementation • 1 Jul 2019 • Jwala Dhamala, Sandesh Ghimire, John L. Sapp, B. Milan Horacek, Linwei Wang
In this paper, we present a novel graph convolutional VAE to allow generative modeling of non-Euclidean data, and utilize it to embed Bayesian optimization of large graphs into a small latent space.
no code implementations • 12 May 2019 • Sandesh Ghimire, Jwala Dhamala, Prashnna Kumar Gyawali, John L. Sapp, B. Milan Horacek, Linwei Wang
We introduce a novel model-constrained inference framework that replaces conventional physiological models with a deep generative model trained to generate TMP sequences from low-dimensional generative factors.
1 code implementation • 5 Mar 2019 • Sandesh Ghimire, Prashnna Kumar Gyawali, Jwala Dhamala, John L. Sapp, Milan Horacek, Linwei Wang
Deep learning networks have shown state-of-the-art performance in many image reconstruction problems.
no code implementations • 31 Oct 2018 • Prashnna K Gyawali, Cameron Knight, Sandesh Ghimire, B. Milan Horacek, John L. Sapp, Linwei Wang
While deep representation learning has become increasingly capable of separating task-relevant representations from other confounding factors in the data, two significant challenges remain.
no code implementations • 12 Oct 2018 • Sandesh Ghimire, Prashnna Kumar Gyawali, John L. Sapp, Milan Horacek, Linwei Wang
The results demonstrate that the generalization ability of an inverse reconstruction network can be improved by constrained stochasticity combined with global aggregation of temporal information in the latent space.
1 code implementation • 4 Aug 2018 • Prashnna K Gyawali, B. Milan Horacek, John L. Sapp, Linwei Wang
In this work, we present a conditional variational autoencoder (VAE) to extract the subject-specific adjustment to the ECG data, conditioned on task-specific representations learned from a deterministic encoder.