Search Results for author: Joseph O. Deasy

Found 11 papers, 2 papers with code

Wasserstein Image Local Analysis: Histogram of Orientations, Smoothing and Edge Detection

no code implementations11 May 2022 Jiening Zhu, Harini Veeraraghavan, Larry Norton, Joseph O. Deasy, Allen Tannenbaum

We approach the directionality problem from a novel perspective by the use of the optimal transport map of a local image patch to a uni-color patch of its mean.

Edge Detection

Unpaired cross-modality educed distillation (CMEDL) for medical image segmentation

no code implementations16 Jul 2021 Jue Jiang, Andreas Rimner, Joseph O. Deasy, Harini Veeraraghavan

Network design, methods to combine MRI with CT information, distillation learning under informative (MRI to CT), weak (CT to MRI) and equal teacher (MRI to MRI), and ablation tests were performed.

Image Segmentation Medical Image Segmentation +4

Nested-block self-attention for robust radiotherapy planning segmentation

no code implementations26 Feb 2021 Harini Veeraraghavan, Jue Jiang, Sharif Elguindi, Sean L. Berry, Ifeanyirochukwu Onochie, Aditya Apte, Laura Cervino, Joseph O. Deasy

NBSA's segmentations were less variable than multiple 3D methods, including for small organs with low soft-tissue contrast such as the submandibular glands (surface Dice of 0. 90).

Anatomy Computational Efficiency

PSIGAN: Joint probabilistic segmentation and image distribution matching for unpaired cross-modality adaptation based MRI segmentation

1 code implementation18 Jul 2020 Jue Jiang, Yu Chi Hu, Neelam Tyagi, Andreas Rimner, Nancy Lee, Joseph O. Deasy, Sean Berry, Harini Veeraraghavan

Our method achieved an overall average DSC of 0. 87 on T1w and 0. 90 on T2w for the abdominal organs, 0. 82 on T2wFS for the parotid glands, and 0. 77 on T2w MRI for lung tumors.

Generative Adversarial Network MRI segmentation +4

Integrating cross-modality hallucinated MRI with CT to aid mediastinal lung tumor segmentation

no code implementations10 Sep 2019 Jue Jiang, Jason Hu, Neelam Tyagi, Andreas Rimner, Sean L. Berry, Joseph O. Deasy, Harini Veeraraghavan

Our approach, called cross-modality educed deep learning segmentation (CMEDL) combines CT and pseudo MR produced from CT by aligning their features to obtain segmentation on CT.

Segmentation Tumor Segmentation

Kernel Wasserstein Distance

no code implementations22 May 2019 Jung Hun Oh, Maryam Pouryahya, Aditi Iyer, Aditya P. Apte, Allen Tannenbaum, Joseph O. Deasy

The Wasserstein distance is a powerful metric based on the theory of optimal transport.

Clustering

Reproducible and Interpretable Spiculation Quantification for Lung Cancer Screening

1 code implementation24 Aug 2018 Wookjin Choi, Saad Nadeem, Sadegh Riyahi, Joseph O. Deasy, Allen Tannenbaum, Wei Lu

The spiculation quantification measures was then applied to the radiomics framework for pathological malignancy prediction with reproducible semi-automatic segmentation of nodule.

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