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Found 4 papers, 1 papers with code
Recoverability of Ancestral Recombination Graph Topologies
Recombination is a powerful evolutionary process that shapes the genetic diversity observed in the populations of many species.
Ancestral protein sequence reconstruction using a tree-structured Ornstein-Uhlenbeck variational autoencoder
We introduce a deep generative model for representation learning of biological sequences that, unlike existing models, explicitly represents the evolutionary process.
Combinatorics of polymer models of early metabolism
Polymer models are a widely used tool to study the prebiotic formation of metabolism at the origins of life.
KwARG: Parsimonious reconstruction of ancestral recombination graphs with recurrent mutation
The reconstruction of possible histories given a sample of genetic data in the presence of recombination and recurrent mutation is a challenging problem, but can provide key insights into the evolution of a population.
