Synaptic Cleft Segmentation in Non-Isotropic Volume Electron Microscopy of the Complete Drosophila Brain

no code implementations • 7 May 2018 • Larissa Heinrich, Jan Funke, Constantin Pape, Juan Nunez-Iglesias, Stephan Saalfeld

Neural circuit reconstruction at single synapse resolution is increasingly recognized as crucially important to decipher the function of biological nervous systems.

scikit-image: Image processing in Python

1 code implementation • 23 Jul 2014 • Stefan van der Walt, Johannes L. Schönberger, Juan Nunez-Iglesias, François Boulogne, Joshua D. Warner, Neil Yager, Emmanuelle Gouillart, Tony Yu, the scikit-image contributors

scikit-image is an image processing library that implements algorithms and utilities for use in research, education and industry applications.

2D Object Detection

Machine learning of hierarchical clustering to segment 2D and 3D images

1 code implementation • 25 Mar 2013 • Juan Nunez-Iglesias, Ryan Kennedy, Toufiq Parag, Jianbo Shi, Dmitri B. Chklovskii

We aim to improve segmentation through the use of machine learning tools during region agglomeration.

Active Learning BIG-bench Machine Learning +3