Search Results for author: Kishan Kc

Found 6 papers, 3 papers with code

Sparse Covariance Modeling in High Dimensions with Gaussian Processes

no code implementations NeurIPS 2018 Rui Li, Kishan Kc, Feng Cui, Justin Domke, Anne Haake

This paper studies statistical relationships among components of high-dimensional observations varying across non-random covariates.

Gaussian Processes Vocal Bursts Intensity Prediction

Question-Context Alignment and Answer-Context Dependencies for Effective Answer Sentence Selection

no code implementations3 Jun 2023 Minh Van Nguyen, Kishan Kc, Toan Nguyen, Thien Huu Nguyen, Ankit Chadha, Thuy Vu

In this paper, we propose to improve the candidate scoring by explicitly incorporating the dependencies between question-context and answer-context into the final representation of a candidate.

Open-Domain Question Answering Sentence

Predicting Biomedical Interactions with Probabilistic Model Selection for Graph Neural Networks

no code implementations22 Nov 2022 Kishan Kc, Rui Li, Paribesh Regmi, Anne R. Haake

Experiments on four interaction datasets show that our proposed method achieves accurate and calibrated predictions.

Model Selection

Predicting Biomedical Interactions with Higher-Order Graph Convolutional Networks

1 code implementation16 Oct 2020 Kishan Kc, Rui Li, Feng Cui, Anne Haake

Recently, graph neural networks have been proposed to effectively learn representations for biomedical entities and achieved state-of-the-art results in biomedical interaction prediction.

Link Prediction

Interpretable Structured Learning with Sparse Gated Sequence Encoder for Protein-Protein Interaction Prediction

1 code implementation16 Oct 2020 Kishan Kc, Feng Cui, Anne Haake, Rui Li

Although various deep learning models in Siamese architecture have been proposed to model PPIs from sequences, these methods are computationally expensive for a large number of PPIs due to the pairwise encoding process.

GNE: a deep learning framework for gene network inference by aggregating biological information

1 code implementation BMC Systems Biology 2019 Kishan KC, Rui Li, Feng Cui, Qi Yu, Anne R. Haake

However, it is still a challenging task to aggregate heterogeneous biological information such as gene expression and gene interactions to achieve more accurate inference for prediction and discovery of new gene interactions.

 Ranked #1 on Gene Interaction Prediction on BioGRID(yeast) (using extra training data)

Gene Interaction Prediction Link Prediction

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