Search Results for author: Krzysztof J. Gorgolewski

Found 5 papers, 1 papers with code

The Past, Present, and Future of the Brain Imaging Data Structure (BIDS)

no code implementations11 Sep 2023 Russell A. Poldrack, Christopher J. Markiewicz, Stefan Appelhoff, Yoni K. Ashar, Tibor Auer, Sylvain Baillet, Shashank Bansal, Leandro Beltrachini, Christian G. Benar, Giacomo Bertazzoli, Suyash Bhogawar, Ross W. Blair, Marta Bortoletto, Mathieu Boudreau, Teon L. Brooks, Vince D. Calhoun, Filippo Maria Castelli, Patricia Clement, Alexander L Cohen, Julien Cohen-Adad, Sasha D'Ambrosio, Gilles de Hollander, María de la iglesia-Vayá, Alejandro de la Vega, Arnaud Delorme, Orrin Devinsky, Dejan Draschkow, Eugene Paul Duff, Elizabeth Dupre, Eric Earl, Oscar Esteban, Franklin W. Feingold, Guillaume Flandin, anthony galassi, Giuseppe Gallitto, Melanie Ganz, Rémi Gau, James Gholam, Satrajit S. Ghosh, Alessio Giacomel, Ashley G Gillman, Padraig Gleeson, Alexandre Gramfort, Samuel Guay, Giacomo Guidali, Yaroslav O. Halchenko, Daniel A. Handwerker, Nell Hardcastle, Peer Herholz, Dora Hermes, Christopher J. Honey, Robert B. Innis, Horea-Ioan Ioanas, Andrew Jahn, Agah Karakuzu, David B. Keator, Gregory Kiar, Balint Kincses, Angela R. Laird, Jonathan C. Lau, Alberto Lazari, Jon Haitz Legarreta, Adam Li, Xiangrui Li, Bradley C. Love, Hanzhang Lu, Camille Maumet, Giacomo Mazzamuto, Steven L. Meisler, Mark Mikkelsen, Henk Mutsaerts, Thomas E. Nichols, Aki Nikolaidis, Gustav Nilsonne, Guiomar Niso, Martin Norgaard, Thomas W Okell, Robert Oostenveld, Eduard Ort, Patrick J. Park, Mateusz Pawlik, Cyril R. Pernet, Franco Pestilli, Jan Petr, Christophe Phillips, Jean-Baptiste Poline, Luca Pollonini, Pradeep Reddy Raamana, Petra Ritter, Gaia Rizzo, Kay A. Robbins, Alexander P. Rockhill, Christine Rogers, Ariel Rokem, Chris Rorden, Alexandre Routier, Jose Manuel Saborit-Torres, Taylor Salo, Michael Schirner, Robert E. Smith, Tamas Spisak, Julia Sprenger, Nicole C. Swann, Martin Szinte, Sylvain Takerkart, Bertrand Thirion, Adam G. Thomas, Sajjad Torabian, Gael Varoquaux, Bradley Voytek, Julius Welzel, Martin Wilson, Tal Yarkoni, Krzysztof J. Gorgolewski

The Brain Imaging Data Structure (BIDS) is a community-driven standard for the organization of data and metadata from a growing range of neuroscience modalities.

DeepDefacer: Automatic Removal of Facial Features via U-Net Image Segmentation

no code implementations31 May 2022 Anish Khazane, Julien Hoachuck, Krzysztof J. Gorgolewski, Russell A. Poldrack

In this paper, we introduce DeepDefacer, an application of deep learning to MRI anonymization that uses a streamlined 3D U-Net network to mask facial regions in MRI images with a significant increase in speed over traditional de-identification software.

De-identification Image Segmentation +1

Fine-grain atlases of functional modes for fMRI analysis

no code implementations5 Mar 2020 Kamalaker Dadi, Gaël Varoquaux, Antonia Machlouzarides-Shalit, Krzysztof J. Gorgolewski, Demian Wassermann, Bertrand Thirion, Arthur Mensch

We demonstrate the benefits of extracting reduced signals on our fine-grain atlases for many classic functional data analysis pipelines: stimuli decoding from 12, 334 brain responses, standard GLM analysis of fMRI across sessions and individuals, extraction of resting-state functional-connectomes biomarkers for 2, 500 individuals, data compression and meta-analysis over more than 15, 000 statistical maps.

Data Compression

Computational and informatics advances for reproducible data analysis in neuroimaging

no code implementations24 Sep 2018 Russell A. Poldrack, Krzysztof J. Gorgolewski, Gael Varoquaux

We argue that openness and transparency are critical for reproducibility, and we outline an ecosystem for open and transparent science that has emerged within the human neuroimaging community.

The Dynamics of Functional Brain Networks: Integrated Network States during Cognitive Function

1 code implementation10 Nov 2015 James M. Shine, Patrick G. Bissett, Peter T. Bell, Oluwasanmi Koyejo, Joshua H. Balsters, Krzysztof J. Gorgolewski, Craig A. Moodie, Russell A. Poldrack

Higher brain function relies upon the ability to flexibly integrate information across specialized communities of brain regions, however it is unclear how this mechanism manifests over time.

Neurons and Cognition

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