1 code implementation • 10 Nov 2023 • Davide Gurnari, Aldo Guzmán-Sáenz, Filippo Utro, Aritra Bose, Saugata Basu, Laxmi Parida
Identifying molecular signatures from complex disease patients with underlying symptomatic similarities is a significant challenge in analysis of high dimensional multi-omics data.
no code implementations • 19 Jan 2021 • Negin Karisani, Daniel E. Platt, Saugata Basu, Laxmi Parida
In this article, we propose a pipeline to aid practitioners in analyzing clinical notes and revealing the pathways associated with this disease.
no code implementations • 30 Nov 2020 • Lingjing Jiang, Niina Haiminen, Anna-Paola Carrieri, Shi Huang, Yoshiki Vazquez-Baeza, Laxmi Parida, Ho-Cheol Kim, Austin D. Swafford, Rob Knight, Loki Natarajan
In our paper, we compare the performance of popular model prediction metric MSE and proposed reproducibility criterion Stability in evaluating four widely used feature selection methods in both simulations and experimental microbiome applications.
no code implementations • 7 Oct 2013 • Dan He, Irina Rish, David Haws, Simon Teyssedre, Zivan Karaman, Laxmi Parida
Whole genome prediction of complex phenotypic traits using high-density genotyping arrays has attracted a great deal of attention, as it is relevant to the fields of plant and animal breeding and genetic epidemiology.