Search Results for author: Lisa M. Koch

Found 11 papers, 6 papers with code

Disentangling representations of retinal images with generative models

no code implementations29 Feb 2024 Sarah Müller, Lisa M. Koch, Hendrik P. A. Lensch, Philipp Berens

Retinal fundus images play a crucial role in the early detection of eye diseases and, using deep learning approaches, recent studies have even demonstrated their potential for detecting cardiovascular risk factors and neurological disorders.

Disentanglement Image Generation

Right for the Wrong Reason: Can Interpretable ML Techniques Detect Spurious Correlations?

1 code implementation23 Jul 2023 Susu Sun, Lisa M. Koch, Christian F. Baumgartner

Such dependencies on confounding information can be difficult to detect using performance metrics if the test data comes from the same distribution as the training data.

Deep Hypothesis Tests Detect Clinically Relevant Subgroup Shifts in Medical Images

1 code implementation8 Mar 2023 Lisa M. Koch, Christian M. Schürch, Christian F. Baumgartner, Arthur Gretton, Philipp Berens

We formulate subgroup shift detection in the framework of statistical hypothesis testing and show that recent state-of-the-art statistical tests can be effectively applied to subgroup shift detection on medical imaging data.

Inherently Interpretable Multi-Label Classification Using Class-Specific Counterfactuals

1 code implementation1 Mar 2023 Susu Sun, Stefano Woerner, Andreas Maier, Lisa M. Koch, Christian F. Baumgartner

Furthermore, as we show in this paper, current explanation techniques do not perform adequately in the multi-label scenario, in which multiple medical findings may co-occur in a single image.

Classification Clinical Knowledge +1

Learning to Segment Medical Images with Scribble-Supervision Alone

no code implementations12 Jul 2018 Yigit B. Can, Krishna Chaitanya, Basil Mustafa, Lisa M. Koch, Ender Konukoglu, Christian F. Baumgartner

We find that the networks trained on scribbles suffer from a remarkably small degradation in Dice of only 2. 9% (cardiac) and 4. 5% (prostate) with respect to a network trained on full annotations.

Anatomy Image Segmentation +3

Visual Feature Attribution using Wasserstein GANs

3 code implementations CVPR 2018 Christian F. Baumgartner, Lisa M. Koch, Kerem Can Tezcan, Jia Xi Ang, Ender Konukoglu

Attributing the pixels of an input image to a certain category is an important and well-studied problem in computer vision, with applications ranging from weakly supervised localisation to understanding hidden effects in the data.

Employing Weak Annotations for Medical Image Analysis Problems

no code implementations21 Aug 2017 Martin Rajchl, Lisa M. Koch, Christian Ledig, Jonathan Passerat-Palmbach, Kazunari Misawa, Kensaku MORI, Daniel Rueckert

To efficiently establish training databases for machine learning methods, collaborative and crowdsourcing platforms have been investigated to collectively tackle the annotation effort.

Computed Tomography (CT) Liver Segmentation +1

SonoNet: Real-Time Detection and Localisation of Fetal Standard Scan Planes in Freehand Ultrasound

2 code implementations16 Dec 2016 Christian F. Baumgartner, Konstantinos Kamnitsas, Jacqueline Matthew, Tara P. Fletcher, Sandra Smith, Lisa M. Koch, Bernhard Kainz, Daniel Rueckert

In this paper, we propose a novel method based on convolutional neural networks which can automatically detect 13 fetal standard views in freehand 2D ultrasound data as well as provide a localisation of the fetal structures via a bounding box.

Anatomy Retrieval

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