Velde: constructing cell potential landscapes by RNA velocity vector field decomposition

no code implementations • 17 Nov 2023 • Junbo Jia, Luonan Chen

By calculating the corresponding potential functions, potential landscapes for both cell differentiation and the cell cycle are obtained.

Time Series Prediction by Multi-task GPR with Spatiotemporal Information Transformation

1 code implementation • 26 Apr 2022 • Peng Tao, Xiaohu Hao, Jie Cheng, Luonan Chen

Making an accurate prediction of an unknown system only from a short-term time series is difficult due to the lack of sufficient information, especially in a multi-step-ahead manner.

GPR Time Series +1

Spatiotemporal information conversion machine for time-series prediction

1 code implementation • 3 Jul 2021 • Hao Peng, Pei Chen, Rui Liu, Luonan Chen

Making predictions in a robust way is a difficult task only based on the observed data of a nonlinear system.

Causal Inference Time Series +1

Ontology-based systematic classification and analysis of coronaviruses, hosts, and host-coronavirus interactions towards deep understanding of COVID-19

1 code implementation • 31 May 2020 • Hong Yu, Li Li, Hsin-hui Huang, Yang Wang, Yingtong Liu, Edison Ong, Anthony Huffman, Tao Zeng, Jingsong Zhang, Pengpai Li, Zhiping Liu, Xiangyan Zhang, Xianwei Ye, Samuel K. Handelman, Gerry Higgins, Gilbert S. Omenn, Brian Athey, Junguk Hur, Luonan Chen, Yongqun He

We hypothesized that ontology can be used as an integrative platform to classify and analyze HCI and disease outcomes.

Other Quantitative Biology