no code implementations • 16 May 2020 • Weston D. Viles, Juliette C. Madan, Hongzhe Li, Jason C. Moore, Margaret R. Karagas, Anne G. Hoen
Here we quantify the complexity of the ecological relationships within the human infant gut microbiota ecosystem as a function of the information contained in the nonlinear associations of a sequence of increasingly-specified maximum entropy representations of the system.
1 code implementation • 22 Sep 2019 • Zhigang Li, Lu Tian, A. James O'Malley, Margaret R. Karagas, Anne G. Hoen, Brock C. Christensen, Juliette C. Madan, Quran Wu, Raad Z. Gharaibeh, Christian Jobin, Hongzhe Li
The target of inference in microbiome analyses is usually relative abundance (RA) because RA in a sample (e. g., stool) can be considered as an approximation of RA in an entire ecosystem (e. g., gut).
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