Search Results for author: Martin J. Menten

Found 13 papers, 7 papers with code

Spatiotemporal Representation Learning for Short and Long Medical Image Time Series

no code implementations12 Mar 2024 Chengzhi Shen, Martin J. Menten, Hrvoje Bogunović, Ursula Schmidt-Erfurth, Hendrik Scholl, Sobha Sivaprasad, Andrew Lotery, Daniel Rueckert, Paul Hager, Robbie Holland

Moreover, tracking longer term developments that occur over months or years in evolving processes, such as age-related macular degeneration (AMD), is essential for accurate prognosis.

Contrastive Learning Decision Making +3

Propagation and Attribution of Uncertainty in Medical Imaging Pipelines

1 code implementation28 Sep 2023 Leonhard F. Feiner, Martin J. Menten, Kerstin Hammernik, Paul Hager, Wenqi Huang, Daniel Rueckert, Rickmer F. Braren, Georgios Kaissis

In this paper, we propose a method to propagate uncertainty through cascades of deep learning models in medical imaging pipelines.

3D Arterial Segmentation via Single 2D Projections and Depth Supervision in Contrast-Enhanced CT Images

1 code implementation15 Sep 2023 Alina F. Dima, Veronika A. Zimmer, Martin J. Menten, Hongwei Bran Li, Markus Graf, Tristan Lemke, Philipp Raffler, Robert Graf, Jan S. Kirschke, Rickmer Braren, Daniel Rueckert

In this work, we propose a novel method to segment the 3D peripancreatic arteries solely from one annotated 2D projection per training image with depth supervision.

Segmentation

A skeletonization algorithm for gradient-based optimization

1 code implementation ICCV 2023 Martin J. Menten, Johannes C. Paetzold, Veronika A. Zimmer, Suprosanna Shit, Ivan Ezhov, Robbie Holland, Monika Probst, Julia A. Schnabel, Daniel Rueckert

Finally, we demonstrate the utility of our algorithm by integrating it with two medical image processing applications that use gradient-based optimization: deep-learning-based blood vessel segmentation, and multimodal registration of the mandible in computed tomography and magnetic resonance images.

Benchmarking

Metrics to Quantify Global Consistency in Synthetic Medical Images

no code implementations1 Aug 2023 Daniel Scholz, Benedikt Wiestler, Daniel Rueckert, Martin J. Menten

In this work, we introduce two metrics that can measure the global consistency of synthetic images on a per-image basis.

Data Augmentation Image Generation

Best of Both Worlds: Multimodal Contrastive Learning with Tabular and Imaging Data

1 code implementation CVPR 2023 Paul Hager, Martin J. Menten, Daniel Rueckert

Medical datasets and especially biobanks, often contain extensive tabular data with rich clinical information in addition to images.

Contrastive Learning

Automated analysis of diabetic retinopathy using vessel segmentation maps as inductive bias

no code implementations28 Oct 2022 Linus Kreitner, Ivan Ezhov, Daniel Rueckert, Johannes C. Paetzold, Martin J. Menten

Recent studies suggest that early stages of diabetic retinopathy (DR) can be diagnosed by monitoring vascular changes in the deep vascular complex.

Image Quality Assessment Inductive Bias +2

Physiology-based simulation of the retinal vasculature enables annotation-free segmentation of OCT angiographs

1 code implementation22 Jul 2022 Martin J. Menten, Johannes C. Paetzold, Alina Dima, Bjoern H. Menze, Benjamin Knier, Daniel Rueckert

Encouraged by our method's competitive quantitative and superior qualitative performance, we believe that it constitutes a versatile tool to advance the quantitative analysis of OCTA images.

Benchmarking Retinal Vessel Segmentation +2

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