Search Results for author: Martin Vögele

Found 2 papers, 2 papers with code

Systematic Analysis of Biomolecular Conformational Ensembles with PENSA

1 code implementation6 Dec 2022 Martin Vögele, Neil J. Thomson, Sang T. Truong, Jasper McAvity, Ulrich Zachariae, Ron O. Dror

PENSA implements various methods to systematically compare the distributions of these features across ensembles to find the significant differences between them and identify regions of interest.

ATOM3D: Tasks On Molecules in Three Dimensions

3 code implementations7 Dec 2020 Raphael J. L. Townshend, Martin Vögele, Patricia Suriana, Alexander Derry, Alexander Powers, Yianni Laloudakis, Sidhika Balachandar, Bowen Jing, Brandon Anderson, Stephan Eismann, Risi Kondor, Russ B. Altman, Ron O. Dror

We implement several classes of three-dimensional molecular learning methods for each of these tasks and show that they consistently improve performance relative to methods based on one- and two-dimensional representations.

Cannot find the paper you are looking for? You can Submit a new open access paper.