Search Results for author: Min Cen

Found 5 papers, 1 papers with code

DPSeq: A Novel and Efficient Digital Pathology Classifier for Predicting Cancer Biomarkers using Sequencer Architecture

no code implementations3 May 2023 Min Cen, Xingyu Li, Bangwei Guo, Jitendra Jonnagaddala, Hong Zhang, Xu Steven Xu

Additionally, under the same experimental conditions using the same set of training and testing datasets, DPSeq surpassed 4 CNN (ResNet18, ResNet50, MobileNetV2, and EfficientNet) and 2 transformer (ViT and Swin-T) models, achieving the highest AUROC and AUPRC values in predicting MSI status, BRAF mutation, and CIMP status.

Time to Embrace Natural Language Processing (NLP)-based Digital Pathology: Benchmarking NLP- and Convolutional Neural Network-based Deep Learning Pipelines

no code implementations21 Feb 2023 Min Cen, Xingyu Li, Bangwei Guo, Jitendra Jonnagaddala, Hong Zhang, Xu Steven Xu

However, most digital pathology artificial-intelligence models are based on CNN architectures, probably owing to a lack of data regarding NLP models for pathology images.

Benchmarking whole slide images

RAPS: A Novel Few-Shot Relation Extraction Pipeline with Query-Information Guided Attention and Adaptive Prototype Fusion

1 code implementation15 Oct 2022 Yuzhe Zhang, Min Cen, Tongzhou Wu, Hong Zhang

Few-shot relation extraction (FSRE) aims at recognizing unseen relations by learning with merely a handful of annotated instances.

Relation Relation Extraction

Colorectal cancer survival prediction using deep distribution based multiple-instance learning

no code implementations24 Apr 2022 Xingyu Li, Jitendra Jonnagaddala, Min Cen, Hong Zhang, Xu Steven Xu

Several deep learning algorithms have been developed to predict survival of cancer patients using whole slide images (WSIs). However, identification of image phenotypes within the WSIs that are relevant to patient survival and disease progression is difficult for both clinicians, and deep learning algorithms.

Multiple Instance Learning Survival Prediction +1

Improving Feature Extraction from Histopathological Images Through A Fine-tuning ImageNet Model

no code implementations3 Jan 2022 Xingyu Li, Min Cen, Jinfeng Xu, Hong Zhang, Xu Steven Xu

The extracted features from the finetuned FTX2048 exhibited significantly higher accuracy for predicting tisue types of CRC compared to the off the shelf feature directly from Xception based on ImageNet database.

Transfer Learning

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