Search Results for author: Niha Beig

Found 4 papers, 1 papers with code

Imaging-based histological features are predictive of MET alterations in Non-Small Cell Lung Cancer

no code implementations18 Mar 2022 Rohan P. Joshi, Bolesław L. Osinski, Niha Beig, Lingdao Sha, Kshitij Ingale, Martin C. Stumpe

The association of individual cell features with MET alterations suggested a predictive model could distinguish MET wild-type from MET amplification or MET exon 14 deletion.

whole slide images

Radiomic Deformation and Textural Heterogeneity (R-DepTH) Descriptor to characterize Tumor Field Effect: Application to Survival Prediction in Glioblastoma

no code implementations12 Mar 2021 Marwa Ismail, Prateek Prasanna, Kaustav Bera, Volodymyr Statsevych, Virginia Hill, Gagandeep Singh, Sasan Partovi, Niha Beig, Sean McGarry, Peter Laviolette, Manmeet Ahluwalia, Anant Madabhushi, Pallavi Tiwari

Our work is based on the rationale that highly aggressive tumors tend to grow uncontrollably, leading to pronounced biomechanical tissue deformations in the normal parenchyma, which when combined with local morphological differences in the tumor confines on MRI scans, will comprehensively capture tumor field effect.

Survival Prediction

Spatial-And-Context aware (SpACe) "virtual biopsy" radiogenomic maps to target tumor mutational status on structural MRI

no code implementations17 Jun 2020 Marwa Ismail, Ramon Correa, Kaustav Bera, Ruchika Verma, Anas Saeed Bamashmos, Niha Beig, Jacob Antunes, Prateek Prasanna, Volodymyr Statsevych, Manmeet Ahluwalia, Pallavi Tiwari

We evaluate the efficacy of SpACe maps on MRI scans with co-localized ground truth obtained from corresponding biopsy, to predict the mutation status of 2 driver genes in Glioblastoma: (1) EGFR (n=91), and (2) MGMT (n=81).

MRQy: An Open-Source Tool for Quality Control of MR Imaging Data

1 code implementation10 Apr 2020 Amir Reza Sadri, Andrew Janowczyk, Ren Zou, Ruchika Verma, Niha Beig, Jacob Antunes, Anant Madabhushi, Pallavi Tiwari, Satish E. Viswanath

We present MRQy, a new open-source quality control tool to (a) interrogate MRI cohorts for site- or equipment-based differences, and (b) quantify the impact of MRI artifacts on relative image quality; to help determine how to correct for these variations prior to model development.

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