Search Results for author: Nils Gessert

Found 31 papers, 4 papers with code

Spectral-Spatial Recurrent-Convolutional Networks for In-Vivo Hyperspectral Tumor Type Classification

no code implementations2 Jul 2020 Marcel Bengs, Nils Gessert, Wiebke Laffers, Dennis Eggert, Stephan Westermann, Nina A. Mueller, Andreas O. H. Gerstner, Christian Betz, Alexander Schlaefer

We analyze the value of using multiple hyperspectral bands compared to conventional RGB images and we study several machine learning models' ability to make use of the additional spectral information.

General Classification

Deep learning with 4D spatio-temporal data representations for OCT-based force estimation

1 code implementation20 May 2020 Nils Gessert, Marcel Bengs, Matthias Schlüter, Alexander Schlaefer

Moreover, optical coherence tomography (OCT) and deep learning have been used for estimating forces based on deformation observed in volumetric image data.

Spatio-Temporal Deep Learning Methods for Motion Estimation Using 4D OCT Image Data

no code implementations21 Apr 2020 Marcel Bengs, Nils Gessert, Matthias Schlüter, Alexander Schlaefer

For this purpose, we design and evaluate several 3D and 4D deep learning methods and we propose a new deep learning approach.

Motion Estimation

Spatio-spectral deep learning methods for in-vivo hyperspectral laryngeal cancer detection

no code implementations21 Apr 2020 Marcel Bengs, Stephan Westermann, Nils Gessert, Dennis Eggert, Andreas O. H. Gerstner, Nina A. Mueller, Christian Betz, Wiebke Laffers, Alexander Schlaefer

A recent study has shown that hyperspectral imaging (HSI) can be used for non-invasive detection of head and neck tumors, as precancerous or cancerous lesions show specific spectral signatures that distinguish them from healthy tissue.

A Deep Learning Approach for Motion Forecasting Using 4D OCT Data

no code implementations MIDL 2019 Marcel Bengs, Nils Gessert, Alexander Schlaefer

We propose 4D spatio-temporal deep learning for end-to-end motion forecasting and estimation using a stream of OCT volumes.

Motion Compensation Motion Estimation +3

4D Deep Learning for Multiple Sclerosis Lesion Activity Segmentation

no code implementations20 Apr 2020 Nils Gessert, Marcel Bengs, Julia Krüger, Roland Opfer, Ann-Christin Ostwaldt, Praveena Manogaran, Sven Schippling, Alexander Schlaefer

While deep learning methods for single-scan lesion segmentation are common, deep learning approaches for lesion activity have only been proposed recently.

Lesion Segmentation Segmentation

Learning Preference-Based Similarities from Face Images using Siamese Multi-Task CNNs

no code implementations25 Jan 2020 Nils Gessert, Alexander Schlaefer

The ground-truth for the similarity matching scores is determined by a test that aims to capture users' preferences, interests, and attitude that are relevant for forming romantic relationships.

Melanoma detection with electrical impedance spectroscopy and dermoscopy using joint deep learning models

no code implementations6 Nov 2019 Nils Gessert, Marcel Bengs, Alexander Schlaefer

As a result, we propose a recurrent model with state-max-pooling which automatically learns the relevance of different EIS measurements.

BIG-bench Machine Learning Lesion Classification

Towards Deep Learning-Based EEG Electrode Detection Using Automatically Generated Labels

no code implementations12 Aug 2019 Nils Gessert, Martin Gromniak, Marcel Bengs, Lars Matthäus, Alexander Schlaefer

To overcome the time-consuming data annotation, we generate a large number of ground-truth labels using a robotic setup.

EEG

Spatio-Temporal Deep Learning Models for Tip Force Estimation During Needle Insertion

no code implementations22 May 2019 Nils Gessert, Torben Priegnitz, Thore Saathoff, Sven-Thomas Antoni, David Meyer, Moritz Franz Hamann, Klaus-Peter Jünemann, Christoph Otte, Alexander Schlaefer

Our novel convGRU-CNN architecture results in the lowest mean absolute error of 1. 59 +- 1. 3 mN and a cross-correlation coefficient of 0. 9997, and clearly outperforms the other methods.

Deep Transfer Learning Methods for Colon Cancer Classification in Confocal Laser Microscopy Images

no code implementations20 May 2019 Nils Gessert, Marcel Bengs, Lukas Wittig, Daniel Drömann, Tobias Keck, Alexander Schlaefer, David B. Ellebrecht

For feedback during interventions, real-time in-vivo imaging with confocal laser microscopy has been proposed for differentiation of benign and malignant tissue by manual expert evaluation.

General Classification Image Classification +1

Efficient Neural Architecture Search on Low-Dimensional Data for OCT Image Segmentation

no code implementations7 May 2019 Nils Gessert, Alexander Schlaefer

We propose an efficient approach for NAS in the context of medical, image-based deep learning problems by searching for architectures on low-dimensional data which are subsequently transferred to high-dimensional data.

Image Segmentation Neural Architecture Search +1

Two-path 3D CNNs for calibration of system parameters for OCT-based motion compensation

no code implementations22 Oct 2018 Nils Gessert, Martin Gromniak, Matthias Schlüter, Alexander Schlaefer

Optical coherence tomography (OCT) is an imaging modality which is used in interventions due to its high spatial resolution of few micrometers and its temporal resolution of potentially several hundred volumes per second.

Motion Compensation

Skin Lesion Diagnosis using Ensembles, Unscaled Multi-Crop Evaluation and Loss Weighting

2 code implementations5 Aug 2018 Nils Gessert, Thilo Sentker, Frederic Madesta, Rüdiger Schmitz, Helge Kniep, Ivo Baltruschat, René Werner, Alexander Schlaefer

We identify heavy class imbalance as a key problem for this challenge and consider multiple balancing approaches such as loss weighting and balanced batch sampling.

Meta-Learning

Force Estimation from OCT Volumes using 3D CNNs

no code implementations26 Apr 2018 Nils Gessert, Jens Beringhoff, Christoph Otte, Alexander Schlaefer

Our novel Siamese 3D CNN architecture outperforms single-path methods that achieve a mean average error of 11. 59 +- 6. 7 mN.

Friction

A Deep Learning Approach for Pose Estimation from Volumetric OCT Data

no code implementations10 Mar 2018 Nils Gessert, Matthias Schlüter, Alexander Schlaefer

We use this setup to provide an in-depth analysis on deep learning-based pose estimation from volumes.

Pose Estimation

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