no code implementations • 28 Mar 2024 • Pulkit Khandelwal, Michael Tran Duong, Constanza Fuentes, Amanda Denning, Winifred Trotman, Ranjit Ittyerah, Alejandra Bahena, Theresa Schuck, Marianna Gabrielyan, Karthik Prabhakaran, Daniel Ohm, Gabor Mizsei, John Robinson, Monica Munoz, John Detre, Edward Lee, David Irwin, Corey McMillan, M. Dylan Tisdall, Sandhitsu Das, David Wolk, Paul A. Yushkevich
Magnetic resonance imaging (MRI) is the standard modality to understand human brain structure and function in vivo (antemortem).
no code implementations • 10 Apr 2023 • Mengjin Dong, Long Xie, Sandhitsu R. Das, Jiancong Wang, Laura E. M. Wisse, Robin deFlores, David A. Wolk, Paul A. Yushkevich
Longitudinal assessment of brain atrophy, particularly in the hippocampus, is a well-studied biomarker for neurodegenerative diseases, such as Alzheimer's disease (AD).
2 code implementations • 21 Mar 2023 • Pulkit Khandelwal, Michael Tran Duong, Shokufeh Sadaghiani, Sydney Lim, Amanda Denning, Eunice Chung, Sadhana Ravikumar, Sanaz Arezoumandan, Claire Peterson, Madigan Bedard, Noah Capp, Ranjit Ittyerah, Elyse Migdal, Grace Choi, Emily Kopp, Bridget Loja, Eusha Hasan, Jiacheng Li, Alejandra Bahena, Karthik Prabhakaran, Gabor Mizsei, Marianna Gabrielyan, Theresa Schuck, Winifred Trotman, John Robinson, Daniel Ohm, Edward B. Lee, John Q. Trojanowski, Corey McMillan, Murray Grossman, David J. Irwin, John Detre, M. Dylan Tisdall, Sandhitsu R. Das, Laura E. M. Wisse, David A. Wolk, Paul A. Yushkevich
Postmortem MRI allows brain anatomy to be examined at high resolution and to link pathology measures with morphometric measurements.
no code implementations • 1 Mar 2023 • Sadhana Ravikumar, Ranjit Ittyerah, Sydney Lim, Long Xie, Sandhitsu Das, Pulkit Khandelwal, Laura E. M. Wisse, Madigan L. Bedard, John L. Robinson, Terry Schuck, Murray Grossman, John Q. Trojanowski, Edward B. Lee, M. Dylan Tisdall, Karthik Prabhakaran, John A. Detre, David J. Irwin, Winifred Trotman, Gabor Mizsei, Emilio Artacho-Pérula, Maria Mercedes Iñiguez de Onzono Martin, Maria del Mar Arroyo Jiménez, Monica Muñoz, Francisco Javier Molina Romero, Maria del Pilar Marcos Rabal, Sandra Cebada-Sánchez, José Carlos Delgado González, Carlos de la Rosa-Prieto, Marta Córcoles Parada, David A. Wolk, Ricardo Insausti, Paul A. Yushkevich
When developing tools for automated cortical segmentation, the ability to produce topologically correct segmentations is important in order to compute geometrically valid morphometry measures.
2 code implementations • 14 Oct 2021 • Pulkit Khandelwal, Shokufeh Sadaghiani, Michael Tran Duong, Sadhana Ravikumar, Sydney Lim, Sanaz Arezoumandan, Claire Peterson, Eunice Chung, Madigan Bedard, Noah Capp, Ranjit Ittyerah, Elyse Migdal, Grace Choi, Emily Kopp, Bridget Loja, Eusha Hasan, Jiacheng Li, Karthik Prabhakaran, Gabor Mizsei, Marianna Gabrielyan, Theresa Schuck, John Robinson, Daniel Ohm, Edward Lee, John Q. Trojanowski, Corey McMillan, Murray Grossman, David Irwin, M. Dylan Tisdall, Sandhitsu R. Das, Laura E. M. Wisse, David A. Wolk, Paul A. Yushkevich
Ex vivo MRI of the brain provides remarkable advantages over in vivo MRI for visualizing and characterizing detailed neuroanatomy.
no code implementations • CVPR 2022 • Yifan Wu, Tom Z. Jiahao, Jiancong Wang, Paul A. Yushkevich, M. Ani Hsieh, James C. Gee
Deformable image registration (DIR), aiming to find spatial correspondence between images, is one of the most critical problems in the domain of medical image analysis.
no code implementations • 19 Mar 2021 • Long Xie, Laura E. M. Wisse, Jiancong Wang, Sadhana Ravikumar, Trevor Glenn, Anica Luther, Sydney Lim, David A. Wolk, Paul A. Yushkevich
A hybrid method that integrates the high accuracy of DL and good generalizability of MAS is highly desired and could play an important role in segmentation problems where manually labeled data is hard to generate.