Tract orientation mapping for bundle-specific tractography

2 code implementations • 14 Jun 2018 • Jakob Wasserthal, Peter F. Neher, Klaus H. Maier-Hein

While the major white matter tracts are of great interest to numerous studies in neuroscience and medicine, their manual dissection in larger cohorts from diffusion MRI tractograms is time-consuming, requires expert knowledge and is hard to reproduce.

Clustering

Why rankings of biomedical image analysis competitions should be interpreted with care

no code implementations • 6 Jun 2018 • Lena Maier-Hein, Matthias Eisenmann, Annika Reinke, Sinan Onogur, Marko Stankovic, Patrick Scholz, Tal Arbel, Hrvoje Bogunovic, Andrew P. Bradley, Aaron Carass, Carolin Feldmann, Alejandro F. Frangi, Peter M. Full, Bram van Ginneken, Allan Hanbury, Katrin Honauer, Michal Kozubek, Bennett A. Landman, Keno März, Oskar Maier, Klaus Maier-Hein, Bjoern H. Menze, Henning Müller, Peter F. Neher, Wiro Niessen, Nasir Rajpoot, Gregory C. Sharp, Korsuk Sirinukunwattana, Stefanie Speidel, Christian Stock, Danail Stoyanov, Abdel Aziz Taha, Fons van der Sommen, Ching-Wei Wang, Marc-André Weber, Guoyan Zheng, Pierre Jannin, Annette Kopp-Schneider

International challenges have become the standard for validation of biomedical image analysis methods.

Direct White Matter Bundle Segmentation using Stacked U-Nets

no code implementations • 6 Mar 2017 • Jakob Wasserthal, Peter F. Neher, Fabian Isensee, Klaus H. Maier-Hein

We present a novel supervised approach for direct tract segmentation that shows major performance gains.

Image Segmentation Segmentation +1