Search Results for author: Sana Syed

Found 16 papers, 3 papers with code

Diffusion and Multi-Domain Adaptation Methods for Eosinophil Segmentation

no code implementations17 Mar 2024 Kevin Lin, Donald Brown, Sana Syed, Adam Greene

Eosinophilic Esophagitis (EoE) represents a challenging condition for medical providers today.

Domain Adaptation

Uncertainty Quantification for Eosinophil Segmentation

no code implementations28 Sep 2023 Kevin Lin, Donald Brown, Sana Syed, Adam Greene

The uncertainty can be visualized in an output image to evaluate model performance, provide insight to how deep learning algorithms function, and assist pathologists in identifying eosinophils.

Image Segmentation Segmentation +2

MaNi: Maximizing Mutual Information for Nuclei Cross-Domain Unsupervised Segmentation

1 code implementation29 Jun 2022 Yash Sharma, Sana Syed, Donald E. Brown

Nuclei vary substantially in structure and appearances across different cancer types, leading to a drop in performance of deep learning models when trained on one cancer type and tested on another.

Segmentation Unsupervised Domain Adaptation +1

Unsupervised Shot Boundary Detection for Temporal Segmentation of Long Capsule Endoscopy Videos

no code implementations18 Oct 2021 Sodiq Adewole, Philip Fernandes, James Jablonski, Andrew Copland, Michael Porter, Sana Syed, Donald Brown

However, the search for temporal boundaries in a long video using high dimensional frame-feature matrix is computationally prohibitive and impracticable for real clinical application.

Boundary Detection

HistoTransfer: Understanding Transfer Learning for Histopathology

no code implementations13 Jun 2021 Yash Sharma, Lubaina Ehsan, Sana Syed, Donald E. Brown

In this work, we compare the performance of features extracted from networks trained on ImageNet and histopathology data.

Multi-Task Learning

Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification

1 code implementation19 Mar 2021 Yash Sharma, Aman Shrivastava, Lubaina Ehsan, Christopher A. Moskaluk, Sana Syed, Donald E. Brown

We regularized the clustering mechanism by introducing a KL-divergence loss between the attention weights of patches in a cluster and the uniform distribution.

Image Classification Multiple Instance Learning +1

Lesion2Vec: Deep Metric Learning for Few-Shot Multiple Lesions Recognition in Wireless Capsule Endoscopy Video

no code implementations11 Jan 2021 Sodiq Adewole, Philip Fernandez, Michelle Yeghyayan, James Jablonski, Andrew Copland, Michael Porter, Sana Syed, Donald Brown

Automating the detection of frames containing specific lesion in WCE video would relieve gastroenterologists the arduous task of reviewing the entire video before making diagnosis.

Few-Shot Learning Image Classification +2

Self-Attentive Adversarial Stain Normalization

1 code implementation4 Sep 2019 Aman Shrivastava, Will Adorno, Yash Sharma, Lubaina Ehsan, S. Asad Ali, Sean R. Moore, Beatrice C. Amadi, Paul Kelly, Sana Syed, Donald E. Brown

We propose a Self-Attentive Adversarial Stain Normalization (SAASN) approach for the normalization of multiple stain appearances to a common domain.

Translation whole slide images

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