Search Results for author: Shanzhuo Zhang

Found 8 papers, 3 papers with code

Pre-Training on Large-Scale Generated Docking Conformations with HelixDock to Unlock the Potential of Protein-ligand Structure Prediction Models

no code implementations21 Oct 2023 Lihang Liu, Donglong He, Xianbin Ye, Jingbo Zhou, Shanzhuo Zhang, Xiaonan Zhang, Jun Li, Hua Chai, Fan Wang, Jingzhou He, Liang Zheng, Yonghui Li, Xiaomin Fang

In this work, we show that by pre-training a geometry-aware SE(3)-Equivariant neural network on a large-scale docking conformation generated by traditional physics-based docking tools and then fine-tuning with a limited set of experimentally validated receptor-ligand complexes, we can achieve outstanding performance.

Drug Discovery Molecular Docking

Multimodal Graph Learning for Deepfake Detection

no code implementations12 Sep 2022 Zhiyuan Yan, Peng Sun, Yubo Lang, Shuo Du, Shanzhuo Zhang, Wei Wang, Lei Liu

We evaluate the effectiveness of our method through extensive experiments on widely-used benchmarks and demonstrate that our method outperforms the state-of-the-art detectors in terms of generalization ability and robustness against unknown disturbances.

DeepFake Detection Face Swapping +2

GEM-2: Next Generation Molecular Property Prediction Network by Modeling Full-range Many-body Interactions

1 code implementation11 Aug 2022 Lihang Liu, Donglong He, Xiaomin Fang, Shanzhuo Zhang, Fan Wang, Jingzhou He, Hua Wu

Full-range many-body interactions between electrons have been proven effective in obtaining an accurate solution of the Schr"odinger equation by classical computational chemistry methods, although modeling such interactions consumes an expensive computational cost.

Drug Discovery Graph Regression +2

HelixADMET: a robust and endpoint extensible ADMET system incorporating self-supervised knowledge transfer

no code implementations17 May 2022 Shanzhuo Zhang, Zhiyuan Yan, Yueyang Huang, Lihang Liu, Donglong He, Wei Wang, Xiaomin Fang, Xiaonan Zhang, Fan Wang, Hua Wu, Haifeng Wang

Additionally, the pre-trained model provided by H-ADMET can be fine-tuned to generate new and customised ADMET endpoints, meeting various demands of drug research and development requirements.

Drug Discovery Self-Supervised Learning +1

LiteGEM: Lite Geometry Enhanced Molecular Representation Learning for Quantum Property Prediction

1 code implementation28 Jun 2021 Shanzhuo Zhang, Lihang Liu, Sheng Gao, Donglong He, Xiaomin Fang, Weibin Li, Zhengjie Huang, Weiyue Su, Wenjin Wang

In this report, we (SuperHelix team) present our solution to KDD Cup 2021-PCQM4M-LSC, a large-scale quantum chemistry dataset on predicting HOMO-LUMO gap of molecules.

molecular representation Property Prediction +2

Molecular Representation Learning by Leveraging Chemical Information

1 code implementation NA 2021 Weibin Li, Shanzhuo Zhang, Lihang Liu, Zhengjie Huang, Jieqiong Lei, Xiaomin Fang, Shikun Feng, Fan Wang

As graph neural networks have achieved great success in many domains, some studies apply graph neural networks to molecular property prediction and regard each molecule as a graph.

Graph Property Prediction Molecular Property Prediction +3

Multi-Depth Fusion Network for Whole-Heart CT Image Segmentation

no code implementations IEEE Access 2019 Chengqin Ye, Wei Wang, Shanzhuo Zhang, Kuanquan Wang

Obtaining precise whole-heart segmentation from computed tomography (CT) or other imaging techniques is prerequisite to clinically analyze the cardiac status, which plays an important role in the treatment of cardiovascular diseases.

Computed Tomography (CT) Heart Segmentation +3

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