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Found 8 papers, 0 papers with code
Target search in the CRISPR/Cas9 system: Facilitated diffusion with target cues
We solve our model, obtaining an expression for the average search time of Cas9 for its target.
Genome replication in asynchronously growing microbial populations
In this paper, we predict the abundance of DNA fragments in asynchronously growing cultures from any given stochastic model of the DNA replication program.
Coalescent dynamics of planktonic communities
The dynamics of these rare species is best described by individual-based models.
Population genetics in microchannels
Our analysis is based on a population model in which reproducing cells shift entire lanes of cells towards the open ends of the channel.
Search and localization dynamics of the CRISPR/Cas9 system
The role of Cas9 is to search for specific target sequences on the DNA and cleave them.
Generalized Euler-Lotka equation for correlated cell divisions
If fluctuations are uncorrelated among different cells, the population growth rate is predicted by the Euler-Lotka equation, which is a classic result in mathematical biology.
Bifractal nature of chromosome contact maps
In this paper, we introduce a multifractal analysis of chromosomal contact maps.
Error-speed correlations in biopolymer synthesis
In this paper, we study fluctuations of error and speed in biopolymer synthesis and show that they are in general correlated.
