Search Results for author: Srijay Deshpande

Found 5 papers, 3 papers with code

Synthesis of Annotated Colorectal Cancer Tissue Images from Gland Layout

no code implementations8 May 2023 Srijay Deshpande, Fayyaz Minhas, Nasir Rajpoot

Such synthetic images and their annotations can be useful in training and evaluation of algorithms in the domain of computational pathology.

CoNIC Challenge: Pushing the Frontiers of Nuclear Detection, Segmentation, Classification and Counting

1 code implementation11 Mar 2023 Simon Graham, Quoc Dang Vu, Mostafa Jahanifar, Martin Weigert, Uwe Schmidt, Wenhua Zhang, Jun Zhang, Sen yang, Jinxi Xiang, Xiyue Wang, Josef Lorenz Rumberger, Elias Baumann, Peter Hirsch, Lihao Liu, Chenyang Hong, Angelica I. Aviles-Rivero, Ayushi Jain, Heeyoung Ahn, Yiyu Hong, Hussam Azzuni, Min Xu, Mohammad Yaqub, Marie-Claire Blache, Benoît Piégu, Bertrand Vernay, Tim Scherr, Moritz Böhland, Katharina Löffler, Jiachen Li, Weiqin Ying, Chixin Wang, Dagmar Kainmueller, Carola-Bibiane Schönlieb, Shuolin Liu, Dhairya Talsania, Yughender Meda, Prakash Mishra, Muhammad Ridzuan, Oliver Neumann, Marcel P. Schilling, Markus Reischl, Ralf Mikut, Banban Huang, Hsiang-Chin Chien, Ching-Ping Wang, Chia-Yen Lee, Hong-Kun Lin, Zaiyi Liu, Xipeng Pan, Chu Han, Jijun Cheng, Muhammad Dawood, Srijay Deshpande, Raja Muhammad Saad Bashir, Adam Shephard, Pedro Costa, João D. Nunes, Aurélio Campilho, Jaime S. Cardoso, Hrishikesh P S, Densen Puthussery, Devika R G, Jiji C V, Ye Zhang, Zijie Fang, Zhifan Lin, Yongbing Zhang, Chunhui Lin, Liukun Zhang, Lijian Mao, Min Wu, Vi Thi-Tuong Vo, Soo-Hyung Kim, Taebum Lee, Satoshi Kondo, Satoshi Kasai, Pranay Dumbhare, Vedant Phuse, Yash Dubey, Ankush Jamthikar, Trinh Thi Le Vuong, Jin Tae Kwak, Dorsa Ziaei, Hyun Jung, Tianyi Miao, David Snead, Shan E Ahmed Raza, Fayyaz Minhas, Nasir M. Rajpoot

Nuclear detection, segmentation and morphometric profiling are essential in helping us further understand the relationship between histology and patient outcome.

Nuclear Segmentation Segmentation +2

SynCLay: Interactive Synthesis of Histology Images from Bespoke Cellular Layouts

1 code implementation28 Dec 2022 Srijay Deshpande, Muhammad Dawood, Fayyaz Minhas, Nasir Rajpoot

Tissue image generation based on bespoke cellular layouts through the proposed framework allows users to generate different histological patterns from arbitrary topological arrangement of different types of cells.

Image Generation Nuclear Segmentation

Cellular Segmentation and Composition in Routine Histology Images using Deep Learning

no code implementations4 Mar 2022 Muhammad Dawood, Raja Muhammad Saad Bashir, Srijay Deshpande, Manahil Raza, Adam Shephard

For the prediction of cellular composition with ALBRT on the preliminary test set, we achieved an overall $R^2$ score of 0. 53, consisting of 0. 84 for lymphocytes, 0. 70 for epithelial cells, 0. 70 for plasma and . 060 for eosinophils.

Management Nuclear Segmentation +1

SAFRON: Stitching Across the Frontier for Generating Colorectal Cancer Histology Images

1 code implementation11 Aug 2020 Srijay Deshpande, Fayyaz Minhas, Simon Graham, Nasir Rajpoot

Compared to other existing approaches, our framework is efficient in terms of the memory requirements for training and also in terms of the number of computations to construct a large high-resolution image.

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