SNP2Vec: Scalable Self-Supervised Pre-Training for Genome-Wide Association Study

1 code implementation • BioNLP (ACL) 2022 • Samuel Cahyawijaya, Tiezheng Yu, Zihan Liu, Tiffany T. W. Mak, Xiaopu Zhou, Nancy Y. Ip, Pascale Fung

We apply SNP2Vec to perform long-sequence genomics modeling, and we evaluate the effectiveness of our approach on predicting Alzheimer's disease risk in a Chinese cohort.

Genome Understanding