Search Results for author: Wenhui Lei

Found 12 papers, 11 papers with code

CT Synthesis with Conditional Diffusion Models for Abdominal Lymph Node Segmentation

no code implementations26 Mar 2024 Yongrui Yu, HanYu Chen, Zitian Zhang, Qiong Xiao, Wenhui Lei, Linrui Dai, Yu Fu, Hui Tan, Guan Wang, Peng Gao, Xiaofan Zhang

To address these problems, we present a pipeline that integrates the conditional diffusion model for lymph node generation and the nnU-Net model for lymph node segmentation to improve the segmentation performance of abdominal lymph nodes through synthesizing a diversity of realistic abdominal lymph node data.

Denoising Image Generation +4

Efficient Subclass Segmentation in Medical Images

1 code implementation1 Jul 2023 Linrui Dai, Wenhui Lei, Xiaofan Zhang

One feasible way to reduce the cost is to annotate with coarse-grained superclass labels while using limited fine-grained annotations as a complement.

Segmentation Semantic Segmentation

MedLSAM: Localize and Segment Anything Model for 3D CT Images

1 code implementation26 Jun 2023 Wenhui Lei, Xu Wei, Xiaofan Zhang, Kang Li, Shaoting Zhang

Our findings are twofold: 1) MedLAM is capable of directly localizing any anatomical structure using just a few template scans, yet its performance surpasses that of fully supervised models; 2) MedLSAM not only aligns closely with the performance of SAM and its specialized medical adaptations with manual prompts but achieves this with minimal reliance on extreme point annotations across the entire dataset.

Image Segmentation Semantic Segmentation

CDDSA: Contrastive Domain Disentanglement and Style Augmentation for Generalizable Medical Image Segmentation

1 code implementation22 Nov 2022 Ran Gu, Guotai Wang, Jiangshan Lu, Jingyang Zhang, Wenhui Lei, Yinan Chen, Wenjun Liao, Shichuan Zhang, Kang Li, Dimitris N. Metaxas, Shaoting Zhang

First, a disentangle network is proposed to decompose an image into a domain-invariant anatomical representation and a domain-specific style code, where the former is sent to a segmentation model that is not affected by the domain shift, and the disentangle network is regularized by a decoder that combines the anatomical and style codes to reconstruct the input image.

Disentanglement Domain Generalization +4

Contrastive Semi-supervised Learning for Domain Adaptive Segmentation Across Similar Anatomical Structures

1 code implementation18 Aug 2022 Ran Gu, Jingyang Zhang, Guotai Wang, Wenhui Lei, Tao Song, Xiaofan Zhang, Kang Li, Shaoting Zhang

To solve this problem, we propose Contrastive Semi-supervised learning for Cross Anatomy Domain Adaptation (CS-CADA) that adapts a model to segment similar structures in a target domain, which requires only limited annotations in the target domain by leveraging a set of existing annotated images of similar structures in a source domain.

Anatomy Contrastive Learning +4

HMRNet: High and Multi-Resolution Network with Bidirectional Feature Calibration for Brain Structure Segmentation in Radiotherapy

1 code implementation7 Jun 2022 Hao Fu, Guotai Wang, Wenhui Lei, Wei Xu, Qianfei Zhao, Shichuan Zhang, Kang Li, Shaoting Zhang

Accurate segmentation of Anatomical brain Barriers to Cancer spread (ABCs) plays an important role for automatic delineation of Clinical Target Volume (CTV) of brain tumors in radiotherapy.

Segmentation

Contrastive Domain Disentanglement for Generalizable Medical Image Segmentation

1 code implementation13 May 2022 Ran Gu, Jiangshan Lu, Jingyang Zhang, Wenhui Lei, Xiaofan Zhang, Guotai Wang, Shaoting Zhang

To tackle this deficiency, we propose Contrastive Domain Disentangle (CDD) network for generalizable medical image segmentation.

Disentanglement Domain Generalization +4

One-shot Weakly-Supervised Segmentation in Medical Images

1 code implementation21 Nov 2021 Wenhui Lei, Qi Su, Ran Gu, Na Wang, Xinglong Liu, Guotai Wang, Xiaofan Zhang, Shaoting Zhang

Deep neural networks usually require accurate and a large number of annotations to achieve outstanding performance in medical image segmentation.

Denoising Image Segmentation +5

Domain Composition and Attention for Unseen-Domain Generalizable Medical Image Segmentation

1 code implementation18 Sep 2021 Ran Gu, Jingyang Zhang, Rui Huang, Wenhui Lei, Guotai Wang, Shaoting Zhang

First, we present a domain composition method that represents one certain domain by a linear combination of a set of basis representations (i. e., a representation bank).

Domain Generalization Image Segmentation +2

Automatic Segmentation of Organs-at-Risk from Head-and-Neck CT using Separable Convolutional Neural Network with Hard-Region-Weighted Loss

1 code implementation3 Feb 2021 Wenhui Lei, Haochen Mei, Zhengwentai Sun, Shan Ye, Ran Gu, Huan Wang, Rui Huang, Shichuan Zhang, Shaoting Zhang, Guotai Wang

Despite the stateof-the-art performance achieved by Convolutional Neural Networks (CNNs) for automatic segmentation of OARs, existing methods do not provide uncertainty estimation of the segmentation results for treatment planning, and their accuracy is still limited by several factors, including the low contrast of soft tissues in CT, highly imbalanced sizes of OARs and large inter-slice spacing.

Computed Tomography (CT) Segmentation

Contrastive Learning of Relative Position Regression for One-Shot Object Localization in 3D Medical Images

2 code implementations13 Dec 2020 Wenhui Lei, Wei Xu, Ran Gu, Hao Fu, Shaoting Zhang, Guotai Wang

To address this problem, we present a one-shot framework for organ and landmark localization in volumetric medical images, which does not need any annotation during the training stage and could be employed to locate any landmarks or organs in test images given a support (reference) image during the inference stage.

Contrastive Learning Object Localization +4

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