Search Results for author: Yao-Kun Lei

Found 4 papers, 0 papers with code

Molecular CT: Unifying Geometry and Representation Learning for Molecules at Different Scales

no code implementations22 Dec 2020 Jun Zhang, Yao-Kun Lei, Yaqiang Zhou, Yi Isaac Yang, Yi Qin Gao

Deep learning is changing many areas in molecular physics, and it has shown great potential to deliver new solutions to challenging molecular modeling problems.

Computational Efficiency Representation Learning

Deep Reinforcement Learning of Transition States

no code implementations13 Nov 2020 Jun Zhang, Yao-Kun Lei, Zhen Zhang, Xu Han, Maodong Li, Lijiang Yang, Yi Isaac Yang, Yi Qin Gao

Combining reinforcement learning (RL) and molecular dynamics (MD) simulations, we propose a machine-learning approach (RL$^\ddag$) to automatically unravel chemical reaction mechanisms.

reinforcement-learning Reinforcement Learning (RL)

A Perspective on Deep Learning for Molecular Modeling and Simulations

no code implementations25 Apr 2020 Jun Zhang, Yao-Kun Lei, Zhen Zhang, Junhan Chang, Maodong Li, Xu Han, Lijiang Yang, Yi Isaac Yang, Yi Qin Gao

Deep learning is transforming many areas in science, and it has great potential in modeling molecular systems.

Learning Clustered Representation for Complex Free Energy Landscapes

no code implementations7 Jun 2019 Jun Zhang, Yao-Kun Lei, Xing Che, Zhen Zhang, Yi Isaac Yang, Yi Qin Gao

In this paper we first analyzed the inductive bias underlying the data scattered across complex free energy landscapes (FEL), and exploited it to train deep neural networks which yield reduced and clustered representation for the FEL.

Clustering Dimensionality Reduction +1

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