Search Results for author: Yungui Huang

Found 6 papers, 3 papers with code

A Large Collection of Real-world Pediatric Sleep Studies

1 code implementation26 Feb 2021 Harlin Lee, Boyue Li, Shelly DeForte, Mark Splaingard, Yungui Huang, Yuejie Chi, Simon Lin Linwood

Despite being crucial to health and quality of life, sleep -- especially pediatric sleep -- is not yet well understood.

Sequence-to-Set Semantic Tagging for Complex Query Reformulation and Automated Text Categorization in Biomedical IR using Self-Attention

no code implementations WS 2020 Manirupa Das, Juanxi Li, Eric Fosler-Lussier, Simon Lin, Steve Rust, Yungui Huang, Rajiv Ramnath

Novel contexts, comprising a set of terms referring to one or more concepts, may often arise in complex querying scenarios such as in evidence-based medicine (EBM) involving biomedical literature.

Retrieval Text Categorization

Sequence-to-Set Semantic Tagging: End-to-End Multi-label Prediction using Neural Attention for Complex Query Reformulation and Automated Text Categorization

no code implementations11 Nov 2019 Manirupa Das, Juanxi Li, Eric Fosler-Lussier, Simon Lin, Soheil Moosavinasab, Steve Rust, Yungui Huang, Rajiv Ramnath

Our approach to generate document encodings employing our sequence-to-set models for inference of semantic tags, gives to the best of our knowledge, the state-of-the-art for both, the unsupervised query expansion task for the TREC CDS 2016 challenge dataset when evaluated on an Okapi BM25--based document retrieval system; and also over the MLTM baseline (Soleimani et al, 2016), for both supervised and semi-supervised multi-label prediction tasks on the del. icio. us and Ohsumed datasets.

Multi-Label Classification Retrieval +1

SurfCon: Synonym Discovery on Privacy-Aware Clinical Data

1 code implementation21 Jun 2019 Zhen Wang, Xiang Yue, Soheil Moosavinasab, Yungui Huang, Simon Lin, Huan Sun

To solve the problem, we propose a new framework SurfCon that leverages two important types of information in the privacy-aware clinical data, i. e., the surface form information, and the global context information for synonym discovery.

Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations

4 code implementations12 Jun 2019 Xiang Yue, Zhen Wang, Jingong Huang, Srinivasan Parthasarathy, Soheil Moosavinasab, Yungui Huang, Simon M. Lin, Wen Zhang, Ping Zhang, Huan Sun

Our experimental results demonstrate that the recent graph embedding methods achieve promising results and deserve more attention in the future biomedical graph analysis.

Graph Embedding Link Prediction +2

Phrase2VecGLM: Neural generalized language model--based semantic tagging for complex query reformulation in medical IR

no code implementations WS 2018 Manirupa Das, Eric Fosler-Lussier, Simon Lin, Soheil Moosavinasab, David Chen, Steve Rust, Yungui Huang, Rajiv Ramnath

In this work, we develop a novel, completely unsupervised, neural language model-based document ranking approach to semantic tagging of documents, using the document to be tagged as a query into the GLM to retrieve candidate phrases from top-ranked related documents, thus associating every document with novel related concepts extracted from the text.

Document Ranking Information Retrieval +4

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