Search Results for author: Zahra Shamsi

Found 3 papers, 1 papers with code

Billion-years old proteins show the importance of N-lobe orientation in Imatinib-kinase selectivity

no code implementations27 Mar 2023 Zahra Shamsi, Diwakar Shukla

The molecular origins of proteins' functions are a combinatorial search problem in the proteins' sequence space, which requires enormous resources to solve.

Karyotype AI for Precision Oncology

no code implementations20 Nov 2022 Zahra Shamsi, Drew Bryant, Jacob Wilson, Xiaoyu Qu, Avinava Dubey, Konik Kothari, Mostafa Dehghani, Mariya Chavarha, Valerii Likhosherstov, Brian Williams, Michael Frumkin, Fred Appelbaum, Krzysztof Choromanski, Ali Bashir, Min Fang

These individual chromosomes were used to train and assess deep learning models for classifying the 24 human chromosomes and identifying chromosomal aberrations.

Few-Shot Learning Inductive Bias

REinforcement learning based Adaptive samPling: REAPing Rewards by Exploring Protein Conformational Landscapes

1 code implementation2 Oct 2017 Zahra Shamsi, Kevin J. Cheng, Diwakar Shukla

One of the key limitations of Molecular Dynamics simulations is the computational intractability of sampling protein conformational landscapes associated with either large system size or long timescales.

Biomolecules Biological Physics Chemical Physics

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