1 code implementation • 13 Mar 2024 • Xingyu Lu, He Cao, Zijing Liu, Shengyuan Bai, Leqing Chen, Yuan YAO, Hai-Tao Zheng, Yu Li
Large language models are playing an increasingly significant role in molecular research, yet existing models often generate erroneous information, posing challenges to accurate molecular comprehension.
1 code implementation • 27 Nov 2023 • He Cao, Zijing Liu, Xingyu Lu, Yuan YAO, Yu Li
The rapid evolution of artificial intelligence in drug discovery encounters challenges with generalization and extensive training, yet Large Language Models (LLMs) offer promise in reshaping interactions with complex molecular data.
Ranked #20 on Molecule Captioning on ChEBI-20
no code implementations • 2 Oct 2022 • Zijing Liu, Xiyao Qu, Xuejun Liu, Hongqiang Lyu
In Bayesian optimization (BO) for expensive black-box optimization tasks, acquisition function (AF) guides sequential sampling and plays a pivotal role for efficient convergence to better optima.
no code implementations • 9 Dec 2021 • Yang Xue, Zijing Liu, Xiaomin Fang, Fan Wang
However, neither sequences nor contact maps can fully characterize structures and functions of the proteins, which are closely related to the PPI problem.
1 code implementation • 18 Nov 2021 • Zijing Liu, Xianbin Ye, Xiaomin Fang, Fan Wang, Hua Wu, Haifeng Wang
Machine learning shows great potential in virtual screening for drug discovery.
1 code implementation • 24 Sep 2021 • Yurong Ling, Zijing Liu, Jing-Hao Xue
Dimension reduction plays a pivotal role in analysing high-dimensional data.
1 code implementation • 24 Feb 2021 • Zijing Liu, Mauricio Barahona
We propose a similarity measure for sparsely sampled time course data in the form of a log-likelihood ratio of Gaussian processes (GP).
no code implementations • 6 Apr 2020 • Dongdong Wu, Zijing Liu, Yongchuan Tang
To address multi-source information fusion problem, this paper considers the situation of uncertain information modeling from the closed world to the open world assumption and studies the generation of basic probability assignment (BPA) with incomplete information.
no code implementations • 6 Sep 2019 • Zijing Liu, Mauricio Barahona
We present a graph-theoretical approach to data clustering, which combines the creation of a graph from the data with Markov Stability, a multiscale community detection framework.