Search Results for author: Zulfat Miftahutdinov

Found 15 papers, 5 papers with code

KFU NLP Team at SMM4H 2020 Tasks: Cross-lingual Transfer Learning with Pretrained Language Models for Drug Reactions

1 code implementation SMM4H (COLING) 2020 Zulfat Miftahutdinov, Andrey Sakhovskiy, Elena Tutubalina

The BERT-based multilingual model for classification of English and Russian tweets that report adverse reactions ranked second among 16 and 7 teams at two first subtasks of the SMM4H 2019 Task 2 and obtained a relaxed F1 of 58% on English tweets and 51% on Russian tweets.

Cross-Lingual Transfer Task 2 +1

nach0: Multimodal Natural and Chemical Languages Foundation Model

no code implementations21 Nov 2023 Micha Livne, Zulfat Miftahutdinov, Elena Tutubalina, Maksim Kuznetsov, Daniil Polykovskiy, Annika Brundyn, Aastha Jhunjhunwala, Anthony Costa, Alex Aliper, Alex Zhavoronkov

Large Language Models (LLMs) have substantially driven scientific progress in various domains, and many papers have demonstrated their ability to tackle complex problems with creative solutions.

named-entity-recognition Named Entity Recognition +1

Drug and Disease Interpretation Learning with Biomedical Entity Representation Transformer

1 code implementation22 Jan 2021 Zulfat Miftahutdinov, Artur Kadurin, Roman Kudrin, Elena Tutubalina

We investigate the effectiveness of transferring concept normalization from the general biomedical domain to the clinical trials domain in a zero-shot setting with an absence of labeled data.

Drug Discovery Metric Learning +1

Fair Evaluation in Concept Normalization: a Large-scale Comparative Analysis for BERT-based Models

1 code implementation COLING 2020 Elena Tutubalina, Artur Kadurin, Zulfat Miftahutdinov

Linking of biomedical entity mentions to various terminologies of chemicals, diseases, genes, adverse drug reactions is a challenging task, often requiring non-syntactic interpretation.

CommentsRadar: Dive into Unique Data on All Comments on the Web

no code implementations16 Aug 2019 Sergey Nikolenko, Elena Tutubalina, Zulfat Miftahutdinov, Eugene Beloded

We introduce an entity-centric search engineCommentsRadarthatpairs entity queries with articles and user opinions covering a widerange of topics from top commented sites.

Deep Neural Models for Medical Concept Normalization in User-Generated Texts

no code implementations ACL 2019 Zulfat Miftahutdinov, Elena Tutubalina

In this work, we consider the medical concept normalization problem, i. e., the problem of mapping a health-related entity mention in a free-form text to a concept in a controlled vocabulary, usually to the standard thesaurus in the Unified Medical Language System (UMLS).

Medical Concept Normalization

Sequence Learning with RNNs for Medical Concept Normalization in User-Generated Texts

no code implementations28 Nov 2018 Elena Tutubalina, Zulfat Miftahutdinov, Sergey Nikolenko, Valentin Malykh

In this work, we consider the medical concept normalization problem, i. e., the problem of mapping a disease mention in free-form text to a concept in a controlled vocabulary, usually to the standard thesaurus in the Unified Medical Language System (UMLS).

Medical Concept Normalization Semantic Similarity +1

An Encoder-Decoder Model for ICD-10 Coding of Death Certificates

no code implementations4 Dec 2017 Elena Tutubalina, Zulfat Miftahutdinov

Information extraction from textual documents such as hospital records and healthrelated user discussions has become a topic of intense interest.

Translation

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