FOBIE (Focused Open Biological Information Extraction)

Introduced by Kruiper et al. in In Layman's Terms: Semi-Open Relation Extraction from Scientific Texts

The Focused Open Biology Information Extraction (FOBIE) dataset aims to support IE from Computer-Aided Biomimetics. The dataset contains ~1,500 sentences from scientific biological texts. These sentences are annotated with TRADE-OFFS and syntactically similar relations between unbounded arguments, as well as argument-modifiers.

The FOBIE dataset has been used to explore Semi-Open Relation Extraction (SORE). The code for this and instructions can be found inside the SORE folder, or in the ReadTheDocs documentations.

Source: FOBIE


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