Constructing Semi-Directed Level-1 Phylogenetic Networks from Quarnets

30 Sep 2019  ·  Huebler Sophia, Morris Rachel, Rusinko Joseph, Tao Yifei ·

We introduce two algorithms for reconstructing semi-directed level-1 phylogenetic networks from their complete set of 4-leaf subnetworks, known as quarnets. The first algorithm, the sequential method, begins with a single quarnet and adds on one leaf at a time until all leaves have been placed... The second algorithm, the cherry-blob method, functions similarly to cherry-picking algorithms for phylogenetic trees by identifying exterior network structures from the quarnets. read more

PDF Abstract
No code implementations yet. Submit your code now

Tasks


Datasets


  Add Datasets introduced or used in this paper

Results from the Paper


  Submit results from this paper to get state-of-the-art GitHub badges and help the community compare results to other papers.

Methods


No methods listed for this paper. Add relevant methods here