Mimetic Neural Networks: A unified framework for Protein Design and Folding

7 Feb 2021  ·  Moshe Eliasof, Tue Boesen, Eldad Haber, Chen Keasar, Eran Treister ·

Recent advancements in machine learning techniques for protein folding motivate better results in its inverse problem -- protein design. In this work we introduce a new graph mimetic neural network, MimNet, and show that it is possible to build a reversible architecture that solves the structure and design problems in tandem, allowing to improve protein design when the structure is better estimated. We use the ProteinNet data set and show that the state of the art results in protein design can be improved, given recent architectures for protein folding.

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