1 code implementation • 27 Sep 2024 • Michael S. Yao, Allison Chae, Charles E. Kahn Jr., Walter R. Witschey, James C. Gee, Hersh Sagreiya, Osbert Bastani
In this study, we introduce a framework to intelligently leverage language models by recommending imaging studies for patient cases that are aligned with evidence-based guidelines.
1 code implementation • 11 Aug 2024 • Rohit Jena, Deeksha Sethi, Pratik Chaudhari, James C. Gee
This strong correlation hints to the fact that architectural designs in learning-based methods is unlikely to affect this correlation, and therefore, the performance of learning-based methods.
no code implementations • 11 Jun 2024 • Rohit Jena, Pratik Chaudhari, James C. Gee
By implicitly differentiating end-to-end through an iterative optimization solver, we explicitly exploit invariances of the correspondence matching problem induced by the optimization, while learning registration and label-aware features, and guaranteeing the warp functions to be a local minima of the registration objective in the feature space.
no code implementations • 23 May 2024 • Yue Yang, Mona Gandhi, YuFei Wang, Yifan Wu, Michael S. Yao, Chris Callison-Burch, James C. Gee, Mark Yatskar
KnoBo uses retrieval-augmented language models to design an appropriate concept space paired with an automatic training procedure for recognizing the concept.
no code implementations • 2 Apr 2024 • Yifan Wu, Mengjin Dong, Rohit Jena, Chen Qin, James C. Gee
Leveraging Neural Ordinary Differential Equations (ODE) for registration, this extension work discusses how this framework can aid in the characterization of sequential biological processes.
1 code implementation • 1 Apr 2024 • Rohit Jena, Pratik Chaudhari, James C. Gee
We demonstrate compelling improvements on image registration across a spectrum of modalities and anatomies by measuring structural and landmark overlap of the registered image volumes.
no code implementations • 8 Mar 2024 • Yifan Wu, Yang Liu, Yue Yang, Michael S. Yao, Wenli Yang, Xuehui Shi, Lihong Yang, Dongjun Li, Yueming Liu, James C. Gee, Xuan Yang, Wenbin Wei, Shi Gu
Diagnosing rare diseases presents a common challenge in clinical practice, necessitating the expertise of specialists for accurate identification.
1 code implementation • 9 Feb 2024 • Michael S. Yao, Yimeng Zeng, Hamsa Bastani, Jacob Gardner, James C. Gee, Osbert Bastani
Offline model-based optimization seeks to optimize against a learned surrogate model without querying the true oracle objective function during optimization.
no code implementations • 18 Dec 2023 • Yifan Wu, Rohit Jena, Mehmet Gulsun, Vivek Singh, Puneet Sharma, James C. Gee
Coronary angiography is the gold standard imaging technique for studying and diagnosing coronary artery disease.
no code implementations • 15 Nov 2023 • Yifan Wu, Pengchuan Zhang, Wenhan Xiong, Barlas Oguz, James C. Gee, Yixin Nie
The study explores the effectiveness of the Chain-of-Thought approach, known for its proficiency in language tasks by breaking them down into sub-tasks and intermediate steps, in improving vision-language tasks that demand sophisticated perception and reasoning.
Ranked #1 on Visual Reasoning on Winoground
no code implementations • 13 Dec 2021 • Bhakti Baheti, Satrajit Chakrabarty, Hamed Akbari, Michel Bilello, Benedikt Wiestler, Julian Schwarting, Evan Calabrese, Jeffrey Rudie, Syed Abidi, Mina Mousa, Javier Villanueva-Meyer, Brandon K. K. Fields, Florian Kofler, Russell Takeshi Shinohara, Juan Eugenio Iglesias, Tony C. W. Mok, Albert C. S. Chung, Marek Wodzinski, Artur Jurgas, Niccolo Marini, Manfredo Atzori, Henning Muller, Christoph Grobroehmer, Hanna Siebert, Lasse Hansen, Mattias P. Heinrich, Luca Canalini, Jan Klein, Annika Gerken, Stefan Heldmann, Alessa Hering, Horst K. Hahn, Mingyuan Meng, Lei Bi, Dagan Feng, Jinman Kim, Ramy A. Zeineldin, Mohamed E. Karar, Franziska Mathis-Ullrich, Oliver Burgert, Javid Abderezaei, Aymeric Pionteck, Agamdeep Chopra, Mehmet Kurt, Kewei Yan, Yonghong Yan, Zhe Tang, Jianqiang Ma, Sahar Almahfouz Nasser, Nikhil Cherian Kurian, Mohit Meena, Saqib Shamsi, Amit Sethi, Nicholas J. Tustison, Brian B. Avants, Philip Cook, James C. Gee, Lin Tian, Hastings Greer, Marc Niethammer, Andrew Hoopes, Malte Hoffmann, Adrian V. Dalca, Stergios Christodoulidis, Theo Estiene, Maria Vakalopoulou, Nikos Paragios, Daniel S. Marcus, Christos Davatzikos, Aristeidis Sotiras, Bjoern Menze, Spyridon Bakas, Diana Waldmannstetter
Registration of longitudinal brain MRI scans containing pathologies is challenging due to dramatic changes in tissue appearance.
no code implementations • CVPR 2022 • Yifan Wu, Tom Z. Jiahao, Jiancong Wang, Paul A. Yushkevich, M. Ani Hsieh, James C. Gee
Deformable image registration (DIR), aiming to find spatial correspondence between images, is one of the most critical problems in the domain of medical image analysis.
no code implementations • 3 Jun 2020 • Lingzhi Zhang, Jiancong Wang, Yinshuang Xu, Jie Min, Tarmily Wen, James C. Gee, Jianbo Shi
We propose an image synthesis approach that provides stratified navigation in the latent code space.