Search Results for author: Yuanfeng Ji

Found 13 papers, 8 papers with code

Multi-Compound Transformer for Accurate Biomedical Image Segmentation

1 code implementation28 Jun 2021 Yuanfeng Ji, Ruimao Zhang, Huijie Wang, Zhen Li, Lingyun Wu, Shaoting Zhang, Ping Luo

The recent vision transformer(i. e. for image classification) learns non-local attentive interaction of different patch tokens.

Image Classification Image Segmentation +2

MedShapeNet -- A Large-Scale Dataset of 3D Medical Shapes for Computer Vision

1 code implementation30 Aug 2023 Jianning Li, Zongwei Zhou, Jiancheng Yang, Antonio Pepe, Christina Gsaxner, Gijs Luijten, Chongyu Qu, Tiezheng Zhang, Xiaoxi Chen, Wenxuan Li, Marek Wodzinski, Paul Friedrich, Kangxian Xie, Yuan Jin, Narmada Ambigapathy, Enrico Nasca, Naida Solak, Gian Marco Melito, Viet Duc Vu, Afaque R. Memon, Christopher Schlachta, Sandrine de Ribaupierre, Rajnikant Patel, Roy Eagleson, Xiaojun Chen, Heinrich Mächler, Jan Stefan Kirschke, Ezequiel de la Rosa, Patrick Ferdinand Christ, Hongwei Bran Li, David G. Ellis, Michele R. Aizenberg, Sergios Gatidis, Thomas Küstner, Nadya Shusharina, Nicholas Heller, Vincent Andrearczyk, Adrien Depeursinge, Mathieu Hatt, Anjany Sekuboyina, Maximilian Löffler, Hans Liebl, Reuben Dorent, Tom Vercauteren, Jonathan Shapey, Aaron Kujawa, Stefan Cornelissen, Patrick Langenhuizen, Achraf Ben-Hamadou, Ahmed Rekik, Sergi Pujades, Edmond Boyer, Federico Bolelli, Costantino Grana, Luca Lumetti, Hamidreza Salehi, Jun Ma, Yao Zhang, Ramtin Gharleghi, Susann Beier, Arcot Sowmya, Eduardo A. Garza-Villarreal, Thania Balducci, Diego Angeles-Valdez, Roberto Souza, Leticia Rittner, Richard Frayne, Yuanfeng Ji, Vincenzo Ferrari, Soumick Chatterjee, Florian Dubost, Stefanie Schreiber, Hendrik Mattern, Oliver Speck, Daniel Haehn, Christoph John, Andreas Nürnberger, João Pedrosa, Carlos Ferreira, Guilherme Aresta, António Cunha, Aurélio Campilho, Yannick Suter, Jose Garcia, Alain Lalande, Vicky Vandenbossche, Aline Van Oevelen, Kate Duquesne, Hamza Mekhzoum, Jef Vandemeulebroucke, Emmanuel Audenaert, Claudia Krebs, Timo Van Leeuwen, Evie Vereecke, Hauke Heidemeyer, Rainer Röhrig, Frank Hölzle, Vahid Badeli, Kathrin Krieger, Matthias Gunzer, Jianxu Chen, Timo van Meegdenburg, Amin Dada, Miriam Balzer, Jana Fragemann, Frederic Jonske, Moritz Rempe, Stanislav Malorodov, Fin H. Bahnsen, Constantin Seibold, Alexander Jaus, Zdravko Marinov, Paul F. Jaeger, Rainer Stiefelhagen, Ana Sofia Santos, Mariana Lindo, André Ferreira, Victor Alves, Michael Kamp, Amr Abourayya, Felix Nensa, Fabian Hörst, Alexander Brehmer, Lukas Heine, Yannik Hanusrichter, Martin Weßling, Marcel Dudda, Lars E. Podleska, Matthias A. Fink, Julius Keyl, Konstantinos Tserpes, Moon-Sung Kim, Shireen Elhabian, Hans Lamecker, Dženan Zukić, Beatriz Paniagua, Christian Wachinger, Martin Urschler, Luc Duong, Jakob Wasserthal, Peter F. Hoyer, Oliver Basu, Thomas Maal, Max J. H. Witjes, Gregor Schiele, Ti-chiun Chang, Seyed-Ahmad Ahmadi, Ping Luo, Bjoern Menze, Mauricio Reyes, Thomas M. Deserno, Christos Davatzikos, Behrus Puladi, Pascal Fua, Alan L. Yuille, Jens Kleesiek, Jan Egger

For the medical domain, we present a large collection of anatomical shapes (e. g., bones, organs, vessels) and 3D models of surgical instrument, called MedShapeNet, created to facilitate the translation of data-driven vision algorithms to medical applications and to adapt SOTA vision algorithms to medical problems.

Anatomy Mixed Reality

Multi-frame Collaboration for Effective Endoscopic Video Polyp Detection via Spatial-Temporal Feature Transformation

1 code implementation8 Jul 2021 Lingyun Wu, Zhiqiang Hu, Yuanfeng Ji, Ping Luo, Shaoting Zhang

For example, STFT improves the still image baseline FCOS by 10. 6% and 20. 6% on the comprehensive F1-score of the polyp localization task in CVC-Clinic and ASUMayo datasets, respectively, and outperforms the state-of-the-art video-based method by 3. 6% and 8. 0%, respectively.

RANet: Region Attention Network for Semantic Segmentation

1 code implementation NeurIPS 2020 Dingguo Shen, Yuanfeng Ji, Ping Li, Yi Wang, Di Lin

In contrast to the previous methods, RANet configures the information pathways between the pixels in different regions, enabling the region interaction to exchange the regional context for enhancing all of the pixels in the image.

Object Segmentation +1

AMOS: A Large-Scale Abdominal Multi-Organ Benchmark for Versatile Medical Image Segmentation

1 code implementation16 Jun 2022 Yuanfeng Ji, Haotian Bai, Jie Yang, Chongjian Ge, Ye Zhu, Ruimao Zhang, Zhen Li, Lingyan Zhang, Wanling Ma, Xiang Wan, Ping Luo

Constraint by the high cost of collecting and labeling 3D medical data, most of the deep learning models to date are driven by datasets with a limited number of organs of interest or samples, which still limits the power of modern deep models and makes it difficult to provide a fully comprehensive and fair estimate of various methods.

Image Segmentation Medical Image Segmentation +3

Multi-Scale Context Intertwining for Semantic Segmentation

no code implementations ECCV 2018 Di Lin, Yuanfeng Ji, Dani Lischinski, Daniel Cohen-Or, Hui Huang

Accurate semantic image segmentation requires the joint consideration of local appearance, semantic information, and global scene context.

Image Segmentation Segmentation +1

PRSNet: Part Relation and Selection Network for Bone Age Assessment

no code implementations5 Sep 2019 Yuanfeng Ji, Hao Chen, Dan Lin, Xiaohua Wu, Di Lin

These kinds of information can be effectively captured by the relation of different anatomical parts of hand bone.

Relation

UXNet: Searching Multi-level Feature Aggregation for 3D Medical Image Segmentation

no code implementations16 Sep 2020 Yuanfeng Ji, Ruimao Zhang, Zhen Li, Jiamin Ren, Shaoting Zhang, Ping Luo

Unlike the recent neural architecture search (NAS) methods that typically searched the optimal operators in each network layer, but missed a good strategy to search for feature aggregations, this paper proposes a novel NAS method for 3D medical image segmentation, named UXNet, which searches both the scale-wise feature aggregation strategies as well as the block-wise operators in the encoder-decoder network.

Image Segmentation Neural Architecture Search +3

SyNDock: N Rigid Protein Docking via Learnable Group Synchronization

no code implementations23 May 2023 Yuanfeng Ji, Yatao Bian, Guoji Fu, Peilin Zhao, Ping Luo

Firstly, SyNDock formulates multimeric protein docking as a problem of learning global transformations to holistically depict the placement of chain units of a complex, enabling a learning-centric solution.

Large Language Models as Automated Aligners for benchmarking Vision-Language Models

no code implementations24 Nov 2023 Yuanfeng Ji, Chongjian Ge, Weikai Kong, Enze Xie, Zhengying Liu, Zhengguo Li, Ping Luo

In this work, we address the limitations via Auto-Bench, which delves into exploring LLMs as proficient aligners, measuring the alignment between VLMs and human intelligence and value through automatic data curation and assessment.

Benchmarking World Knowledge

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